RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RWDD4Q6NW29 188 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 AAGABQ6PD74 315 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 RNF135Q8IUD6 432 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 SLC35B2Q8TB61 432 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 C7orf26Q96N11 449 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 TRIM15Q9C019 465 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 MYOZ2Q9NPC6 264 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 APPL1Q9UKG1 709 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 TSPAN16Q9UKR8 245 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF862O60290 1169 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 TMEM63AO94886 807 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 PAMP19021 973 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 AMPD1P23109 780 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 HDAC4P56524 1084 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 ZBTB41Q5SVQ8 909 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 KCNT2Q6UVM3 1135 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 GALNT15Q8N3T1 639 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 ENDOVQ8N8Q3 282 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 KYQ8NBH2 561 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 SLC7A6OSQ96CW6 309 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 TMEM134Q9H6X4 195 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 EFCAB1Q9HAE3 211 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
DNMT3A-202ENST00000321117 E5RJQ4 531 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 BIRC5O15392 142 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CST3P01034 146 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 PTGER2P43116 358 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 BACE1P56817 501 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 SPDYAQ5MJ70 313 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 SEL1L3Q68CR1 1132 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 STRA8Q7Z7C7 330 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 RYBPQ8N488 228 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 EXT2Q93063 718 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 PBXIP1Q96AQ6 731 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 SYT15Q9BQS2 421 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CYB561D2O14569 222 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 TYROBPO43914 113 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 BPGMP07738 259 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 ETS2P15036 469 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 GP5P40197 560 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CASP2P42575 452 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 PSEN1P49768 467 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CLCN3P51790 818 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 GPX6P59796 221 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 TXNRD3NBQ6F5E7 133 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 ISLR2Q6UXK2 745 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 GORASP1Q9BQQ3 440 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 HBS1LQ9Y450 684 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 PGM3O95394 542 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 RARBP10826 455 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 MYL4P12829 197 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 TPI1P60174 286 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 NOMO1Q15155 1222 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 TDRD5Q8NAT2 981 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 SDCCAG3Q96C92 435 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 LRRC40Q9H9A6 602 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CLIC5Q9NZA1 410 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 KAT6AQ92794 2004 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 ITGB4P16144 1822 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 APOA4P06727 396 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 CD48P09326 243 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 STAG3L1P0CL83 205 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 MGAT1P26572 445 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 NDST1P52848 882 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 JAG1P78504 1218 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 OASLQ15646 514 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 UGP2Q16851 508 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 DCAF6Q58WW2 860 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 EBNA1BP2Q99848 306 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 DOT1LQ8TEK3 1739 aa13.13□□□□□ -0.31
DNMT3A-202ENST00000321117 TPP1O14773 563 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 LYPLA1O75608 230 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 ZMPSTE24O75844 475 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 PSMC3P17980 439 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CHN2P52757 468 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 PDK3Q15120 406 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 RNF148Q8N7C7 305 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 DENND1AQ8TEH3 1009 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CCDC68Q9H2F9 335 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 GPAMQ9HCL2 828 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 XPNPEP1Q9NQW7 623 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 ZNF711Q9Y462 761 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 EEF2KO00418 725 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 TXNP10599 105 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 GAD2Q05329 585 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 CAPSQ13938 189 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
DNMT3A-202ENST00000321117 NAT8LQ8N9F0 302 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms