RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 HSPH1Q92598 858 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 PEBP4Q96S96 227 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 CDCA3Q99618 268 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 ASNSD1Q9NWL6 643 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 ASB3Q9Y575 518 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 C2orf16Q68DN1 1984 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 TMEM265A0A087WTH1 108 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 CKMP06732 381 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 HECTD3Q5T447 861 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 C11orf63Q6NUN7 778 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 SYCE2Q6PIF2 218 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 GET4Q7L5D6 327 aaPredicted RBP16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 NT5DC3Q86UY8 548 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 ARHGAP18Q8N392 663 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 CCDC185Q8N715 623 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 PDZD8Q8NEN9 1154 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 NPY6RQ99463 290 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 GKN1Q9NS71 199 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 CLEC1BQ9P126 229 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 AMFRQ9UKV5 643 aa16.05■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC12A8A0AV02 714 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 HNRNPA1P09651 372 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ZDHHC11BP0C7U3 371 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 CEBPBP17676 345 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 SCNN1AP37088 669 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 HADHBP55084 474 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ETF1P62495 437 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ZNF211Q13398 564 aaPredicted RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ANKRD54Q6NXT1 300 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 AADACL2Q6P093 401 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 SCML4Q8N228 414 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 SHKBP1Q8TBC3 707 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 MRPS31Q92665 395 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ANLNQ9NQW6 1124 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 MRPS23Q9Y3D9 190 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 BRWD1Q9NSI6 2320 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 PI4K2BG5E9Z4 385 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 FOSL2P15408 326 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 HOXA9P31269 272 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ATP5C1P36542 298 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 TCEAL1Q15170 157 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 ZC3H12AQ5D1E8 599 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 FNIP1Q8TF40 1166 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 CLIC5Q9NZA1 410 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 XPO7Q9UIA9 1087 aaKnown RBP16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
PDLIM5-202ENST00000318007 OBSL1O75147 1896 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 PRPSAP2O60256 369 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 SRGAP2BP0DMP2 458 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 DESP17661 470 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 HDCP19113 662 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 CASQ1P31415 396 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 PTPN9P43378 593 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 PSEN1P49768 467 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 KCNQ1P51787 676 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 ADAM15Q13444 863 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 PYROXD2Q8N2H3 581 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 CEP295NLQ96MC4 621 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 ZSWIM3Q96MP5 696 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 GUCD1Q96NT3 240 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 SMOC2Q9H3U7 446 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 COMMD8Q9NX08 183 aa16.03■□□□□ 0.16
PDLIM5-202ENST00000318007 DPYSL4O14531 572 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 IRAK2O43187 625 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 CDC25CP30307 473 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 LTBRP36941 435 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 ZXDBP98169 803 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC25A11Q02978 314 aaKnown RBP16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 MEI1Q5TIA1 1274 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 POTEHQ6S545 545 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 SLFN11Q7Z7L1 901 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 ALG3Q92685 438 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 TLR10Q9BXR5 811 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 TKTL2Q9H0I9 626 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 SIK2Q9H0K1 926 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 WDCPQ9H6R7 721 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 DNMT3LQ9UJW3 386 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.16
PDLIM5-202ENST00000318007 CTAGE9A4FU28 777 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 I6L893 689 aaPredicted RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 KCNK3O14649 394 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 ZNF500O60304 480 aaPredicted RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 MOSPD3O75425 235 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 OAS1P00973 400 aaKnown RBP16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 KCNA5P22460 613 aa16.02■□□□□ 0.15
PDLIM5-202ENST00000318007 RPS6KA1Q15418 735 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms