RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CAPN7Q9Y6W3 813 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MED1Q15648 1581 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TBC1D3BA6NDS4 549 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC14BA6NHZ5 514 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GLRA3O75311 464 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FTH1P02794 183 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PDGFRBP09619 1106 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SERPINB8P50452 374 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RHOAP61586 193 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CUL3Q13618 768 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PGM5Q15124 567 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZNHIT3Q15649 155 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZRANB3Q5FWF4 1079 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GPAT2Q6NUI2 795 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 C3orf62Q6ZUJ4 267 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DENND5BQ6ZUT9 1274 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PASD1Q8IV76 773 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CPA6Q8N4T0 437 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ZFP28Q8NHY6 868 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CRELD1Q96HD1 420 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TARS2Q9BW92 718 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SENP6Q9GZR1 1112 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 KBTBD4Q9NVX7 518 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CD274Q9NZQ7 290 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 WHRNQ9P202 907 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPASTQ9UBP0 616 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HMGXB4Q9UGU5 601 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MTO1Q9Y2Z2 717 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CNTNAP5Q8WYK1 1306 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TPRP12270 2363 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 A0A1B0GTH6 734 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GMNCA6NCL1 334 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FAM47DPA6NHR8 397 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SORBS3O60504 671 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 STX11O75558 287 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 NFATC1O95644 943 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HLA-DRAP01903 254 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GHRP10912 638 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 GRK4P32298 578 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 S100A5P33763 92 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TTPAP49638 278 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PSEN2P49810 448 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MRPS15P82914 257 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ITPK1Q13572 414 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 USP10Q14694 798 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CASP8Q14790 479 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPDYCQ5MJ68 293 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SYCP2LQ5T4T6 812 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FAM171A1Q5VUB5 890 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 P3H2Q8IVL5 708 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SMYD4Q8IYR2 804 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MRPL46Q9H2W6 279 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 AGO4Q9HCK5 861 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RRAGDQ9NQL2 400 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FBXO10Q9UK96 956 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TMCC3Q9ULS5 477 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ADGRB1O14514 1584 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CACNB4O00305 520 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TRDMT1O14717 391 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ECDO95905 644 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PNMA6AP0CW24 399 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FGFR2P21802 821 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 LSP1P33241 339 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ARFIP2P53365 341 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 IRX1P78414 480 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CYLC2Q14093 348 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MFSD10Q14728 455 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 NCF4Q15080 339 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 BRMS1LQ5PSV4 323 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 INTS11Q5TA45 600 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DENND1BQ6P3S1 775 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 LRRC8DQ7L1W4 858 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SH3BP5LQ7L8J4 393 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ADSSL1Q8N142 457 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPATA4Q8NEY3 305 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 TMA16Q96EY4 203 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 EEF2KMTQ96G04 330 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 L3MBTL3Q96JM7 780 aaPredicted RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 MCEEQ96PE7 176 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RBM15Q96T37 977 aaKnown RBP eCLIP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 DESI2Q9BSY9 194 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RANBP17Q9H2T7 1088 aaKnown RBP3.28□□□□□ -1.88
CLOCK-201ENST00000309964 C8orf4Q9NR00 106 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 WWOXQ9NZC7 414 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SPG21Q9NZD8 308 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PCSK1NQ9UHG2 260 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CDYLQ9Y232 598 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 COLEC10Q9Y6Z7 277 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 FAM163BP0C2L3 166 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 USP17L7P0C7H9 530 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 RPIAP49247 311 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HNMTP50135 292 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 PPP2R2AP63151 447 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CYP24A1Q07973 514 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 ELP6Q0PNE2 266 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CRY2Q49AN0 593 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 HECTD3Q5T447 861 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CAPN12Q6ZSI9 719 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 SLC24A5Q71RS6 500 aa3.28□□□□□ -1.88
CLOCK-201ENST00000309964 CCDC60Q8IWA6 550 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms