RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 LRRC14BA6NHZ5 514 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MYO1GB0I1T2 1018 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 BTBD19C9JJ37 291 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP26A1O43174 497 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MMP3P08254 477 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MYBP10242 640 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ARFIP2P53365 341 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MCL1Q07820 350 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CXCL17Q6UXB2 119 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ZSCAN18Q8TBC5 510 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 GRAMD1AQ96CP6 724 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CCDC126Q96EE4 140 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ADAM2Q99965 735 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 HEMGNQ9BXL5 484 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC13A1Q9BZW2 595 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 EPN3Q9H201 632 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 IARS2Q9NSE4 1012 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 DDIT4Q9NX09 232 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SATB2Q9UPW6 733 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 DOCK3Q8IZD9 2030 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SCN4AP35499 1836 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 XIRP1Q702N8 1843 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 EIF4E1BA6NMX2 242 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CHGBP05060 677 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 GJB1P08034 283 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 GHRP10912 638 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PTGER2P43116 358 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 UBE3AQ05086 875 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SH3D19Q5HYK7 790 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PDE12Q6L8Q7 609 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CLEC4FQ8N1N0 589 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CERS5Q8N5B7 392 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 JADE3Q92613 823 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 LENG9Q96B70 501 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 APPL1Q9UKG1 709 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SCN9AQ15858 1988 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CCDC85CA6NKD9 419 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CRTAMO95727 393 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PRIM2P49643 509 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 TBL3Q12788 808 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 RAB30Q15771 203 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF284Q2VY69 593 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CMTM5Q96DZ9 223 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 STAMBPL1Q96FJ0 436 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 AHCYL2Q96HN2 611 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 GOLPH3Q9H4A6 298 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PALMDQ9NP74 551 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ZDHHC4Q9NPG8 344 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 VPS51Q9UID3 782 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 FGF10O15520 208 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 POLBP06746 335 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 HOXB8P17481 243 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CTNNB1P35222 781 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ADCYAP1R1P41586 468 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CNTN2Q02246 1040 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PDIA2Q13087 525 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ZCCHC8Q6NZY4 707 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 VSTM1Q6UX27 236 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SYTL1Q8IYJ3 562 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 C2orf49Q9BVC5 232 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 GJB4Q9NTQ9 266 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MAGEB16A2A368 324 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 HMBSP08397 361 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MAPK1P28482 360 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ADGRA1Q86SQ6 560 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CDR2LQ86X02 465 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 DEFB118Q96PH6 123 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SYT15Q9BQS2 421 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 PCDHA2Q9Y5H9 948 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 NCOR1O75376 2440 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 PHIPQ8WWQ0 1821 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 PRR23AA6NEV1 266 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 HSPA9P38646 679 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 LVRNQ6Q4G3 990 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SUGP1Q8IWZ8 645 aaKnown RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 RNF25Q96BH1 459 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 INPP4AQ96PE3 977 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SAE1Q9UBE0 346 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 UBR3Q6ZT12 1888 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 SCN7AQ01118 1682 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 H3BMM5 538 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 MAFO75444 373 aaPredicted RBP8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 POMCP01189 267 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 TMEM253P0C7T8 217 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 HLA-DQA1Q5Y7H0 255 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP4Z1Q86W10 505 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 VPS33AQ96AX1 596 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 CYFIP2Q96F07 1278 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 GPR88Q9GZN0 384 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 PDGFCQ9NRA1 345 aa8.57□□□□□ -1.04
PCDHB1-201ENST00000306549 ABCC13Q9NSE7 274 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms