RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 GRAPLQ8TC17 118 aaPredicted RBP17.22■□□□□ 0.35
SBSPON-201ENST00000297354 GPAMQ9HCL2 828 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 GABBR1Q9UBS5 961 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 MYRFQ9Y2G1 1151 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
SBSPON-201ENST00000297354 XRCC1P18887 633 aaPredicted RBP17.22■□□□□ 0.35
SBSPON-201ENST00000297354 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 RXRGP48443 463 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 RARRES1P49788 294 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 NME3Q13232 169 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 EGFLAMQ63HQ2 1017 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 EXT2Q93063 718 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 SYT11Q9BT88 431 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 NRDE2Q9H7Z3 1164 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 PALMDQ9NP74 551 aa17.22■□□□□ 0.35
SBSPON-201ENST00000297354 CLK2P49760 499 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 HABP4Q5JVS0 413 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 UBA3Q8TBC4 463 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 GRIN3AQ8TCU5 1115 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 GFM2Q969S9 779 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 EFHD1Q9BUP0 239 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 TARS2Q9BW92 718 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 ING2Q9H160 280 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 TUT1Q9H6E5 874 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 PLGRKTQ9HBL7 147 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 TCF7L2Q9NQB0 619 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 UBAP1Q9NZ09 502 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 DAPK2Q9UIK4 370 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 COQ6Q9Y2Z9 468 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 ROBO3Q96MS0 1386 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 COQ9O75208 318 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 CCDC130P13994 396 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 CKMT2P17540 419 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 AVPR1AP37288 418 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 PTK2BQ14289 1009 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 SLC44A1Q8WWI5 657 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 NPAS2Q99743 824 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 PIF1Q9H611 641 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 TDRD3Q9H7E2 651 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 EURLQ9NYK6 297 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 PSMD13Q9UNM6 376 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 FAM149AA5PLN7 773 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 RBL1P28749 1068 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 POU5F1BQ06416 359 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 RALGDSQ12967 914 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 NR1D2Q14995 579 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 CHST15Q7LFX5 561 aaPredicted RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 DAW1Q8N136 415 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 SLCO2A1Q92959 643 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 ATP6V1E2Q96A05 226 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 DMAC2Q9NW81 257 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 DDX56Q9NY93 547 aaKnown RBP17.21■□□□□ 0.35
SBSPON-201ENST00000297354 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
SBSPON-201ENST00000297354 LRP6O75581 1613 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 TPP1O14773 563 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 VILLO15195 856 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 CLIC3O95833 236 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 MAGP20916 626 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 SLC5A2P31639 672 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 NUP107P57740 925 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 GNA12Q03113 381 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 CYP24A1Q07973 514 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 SWSAP1Q6NVH7 229 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 CDC42EP5Q6NZY7 148 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 NUP93Q8N1F7 819 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 GAB3Q8WWW8 586 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 LENG9Q96B70 501 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 GID8Q9NWU2 228 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 ZNF510Q9Y2H8 683 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 BPGMP07738 259 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 BNIP3Q12983 259 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 TMEM198Q66K66 360 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 CATSPER1Q8NEC5 780 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 C20orf27Q9GZN8 174 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 TIMMDC1Q9NPL8 285 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 THOP1P52888 689 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 FAM98CQ17RN3 349 aaKnown RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 ZC3H3Q8IXZ2 948 aaKnown RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 C7orf31Q8N865 590 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 PDCD6IPQ8WUM4 868 aaKnown RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 ZNF512Q96ME7 567 aaPredicted RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 APOL2Q9BQE5 337 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 GCOM2Q9BZD3 368 aaPredicted RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 PCDHAC1Q9H158 963 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 UPF3AQ9H1J1 476 aaKnown RBP17.2■□□□□ 0.34
SBSPON-201ENST00000297354 TLK1Q9UKI8 766 aa17.2■□□□□ 0.34
SBSPON-201ENST00000297354 NDUFB5O43674 189 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CSH1P0DML2 217 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CSH2P0DML3 217 aa17.19■□□□□ 0.34
SBSPON-201ENST00000297354 CDH3P22223 829 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms