RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PCDHB5Q9Y5E4 795 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 H7C4K7 107 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 TP73O15350 636 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 KRT14P02533 472 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 NCAM1P13591 858 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PECAM1P16284 738 aaPredicted RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 DEUP1Q05D60 604 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 BSPRYQ5W0U4 402 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 SCAMP5Q8TAC9 235 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 KCTD15Q96SI1 283 aaPredicted RBP16.16■□□□□ 0.18
LSM6-201ENST00000296581 TXLNGYQ9BZA5 131 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 PIGVQ9NUD9 493 aa16.16■□□□□ 0.18
LSM6-201ENST00000296581 TGM2P21980 687 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 AIF1P55008 147 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 NOMO1Q15155 1222 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 ALS2CLQ60I27 953 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 ANKS3Q6ZW76 656 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 GSTA5Q7RTV2 222 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 TMC3Q7Z5M5 1100 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 RNF168Q8IYW5 571 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 NTAN1Q96AB6 310 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 ZNF689Q96CS4 500 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 TTPALQ9BTX7 342 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 RC3H2Q9HBD1 1191 aaKnown RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 WDR6Q9NNW5 1121 aaKnown RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 RCOR3Q9P2K3 495 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 PLXNA3P51805 1871 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 MYO16Q9Y6X6 1858 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 APOL1O14791 398 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 PPFIA2O75334 1257 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 ATF2P15336 505 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 CSF2RAP15509 400 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 ALDH7A1P49419 539 aaKnown RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 SMARCB1Q12824 385 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 CALCOCO2Q13137 446 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 GPR17Q13304 367 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 TRIP13Q15645 432 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 PPP6R3Q5H9R7 873 aaPredicted RBP16.15■□□□□ 0.18
LSM6-201ENST00000296581 RHBDF2Q6PJF5 856 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 TAS1R1Q7RTX1 841 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 SCN4BQ8IWT1 228 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 IQCKQ8N0W5 287 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 PLD5Q8N7P1 536 aa16.15■□□□□ 0.18
LSM6-201ENST00000296581 AGPSO00116 658 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 EFCAB14O75071 495 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 F9P00740 461 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 AMHP03971 560 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 SCAPQ12770 1279 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 NME3Q13232 169 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 RSPO2Q6UXX9 243 aaPredicted RBP16.14■□□□□ 0.17
LSM6-201ENST00000296581 BBOF1Q8ND07 529 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 EDEM1Q92611 657 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 TMEM121Q9BTD3 319 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 TMEM106CQ9BVX2 250 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 MAGEB5Q9BZ81 275 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 PRDM5Q9NQX1 630 aaPredicted RBP16.14■□□□□ 0.17
LSM6-201ENST00000296581 MTRF1LQ9UGC7 380 aaKnown RBP16.14■□□□□ 0.17
LSM6-201ENST00000296581 GOLGA6BA6NDN3 693 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 PPP1R12AO14974 1030 aaPredicted RBP16.14■□□□□ 0.17
LSM6-201ENST00000296581 MCF2LO15068 1137 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 RAG1P15918 1043 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 ADCY8P40145 1251 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 EIF3EP60228 445 aaKnown RBP16.14■□□□□ 0.17
LSM6-201ENST00000296581 CAV1Q03135 178 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 NPNTQ6UXI9 565 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 TADA2BQ86TJ2 420 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 GLIS1Q8NBF1 620 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 PIK3R5Q8WYR1 880 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 P3H4Q92791 437 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 CSPG4P5Q96PW8 444 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 PRDM16Q9HAZ2 1276 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 PCDH9Q9HC56 1237 aa16.14■□□□□ 0.17
LSM6-201ENST00000296581 MTMR11A4FU01 709 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 IGLV3-25P01717 112 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 ZFXP17010 805 aaPredicted RBP16.13■□□□□ 0.17
LSM6-201ENST00000296581 ADRA1BP35368 520 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 HSD17B3P37058 310 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 YWHAGP61981 247 aaKnown RBP eCLIP16.13■□□□□ 0.17
LSM6-201ENST00000296581 DEFB103AP81534 67 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 DHX9Q08211 1270 aaKnown RBP16.13■□□□□ 0.17
LSM6-201ENST00000296581 MTMR3Q13615 1198 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 UAP1Q16222 522 aaPredicted RBP16.13■□□□□ 0.17
LSM6-201ENST00000296581 PYROXD2Q8N2H3 581 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 TMEM199Q8N511 208 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 ATAD1Q8NBU5 361 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 ADAM32Q8TC27 787 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 C2orf15Q8WU43 125 aaKnown RBP16.13■□□□□ 0.17
LSM6-201ENST00000296581 IGSF21Q96ID5 467 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 PGLYRP2Q96PD5 576 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 DDIT4Q9NX09 232 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 IL37Q9NZH6 218 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 FBXW11Q9UKB1 542 aa16.13■□□□□ 0.17
LSM6-201ENST00000296581 SYNJ2BP-COX16A0A087WUM0 186 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms