RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ACTRT2Q8TDY3 377 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 ATP8B4Q8TF62 1192 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 SMARCD1Q96GM5 515 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 WNK4Q96J92 1243 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 NLNQ9BYT8 704 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 CCDC90BQ9GZT6 254 aa15.2■□□□□ 0.02
SEC16A-202ENST00000290037 C6orf203Q9P0P8 240 aaPredicted RBP15.2■□□□□ 0.02
SEC16A-202ENST00000290037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEC16A-202ENST00000290037 C6orf10Q5SRN2 563 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 GPR63Q9BZJ6 419 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 CCNB1IP1Q9NPC3 277 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 CAP2P40123 477 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 CHI3L2Q15782 390 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TMC3Q7Z5M5 1100 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 GANCQ8TET4 914 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 FIS1Q9Y3D6 152 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 PRPF4O43172 522 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■□□ 19
SEC16A-202ENST00000290037 HPCAL1P37235 193 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 PRKG1Q13976 671 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 PALMDQ9NP74 551 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 NCK2O43639 380 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TRIP4Q15650 581 aaPredicted RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 THEMIS2Q5TEJ8 643 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 EPB41L4AQ9HCS5 686 aaPredicted RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 RGS18Q9NS28 235 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■□□□ 12.4
SEC16A-202ENST00000290037 PARNO95453 639 aaKnown RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 SLC9A1P19634 815 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 YY1P25490 414 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 ERMARDQ5T6L9 678 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF438Q7Z4V0 828 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 KCTD5Q9NXV2 234 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 ESYT3A0FGR9 886 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 KCNA1Q09470 495 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 RNF43Q68DV7 783 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TXNDC11Q6PKC3 985 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 CXCR2P25025 360 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 NET1Q7Z628 596 aaPredicted RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 MUC3BQ9H195 1237 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
SEC16A-202ENST00000290037 PIDD1Q9HB75 910 aa15.19■□□□□ 0.02
SEC16A-202ENST00000290037 TRIM16LQ309B1 348 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 LEMD2Q8NC56 503 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TMEM161AQ9NX61 479 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF862O60290 1169 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 CLPTM1O96005 669 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 S100ZQ8WXG8 99 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 MYOZ2Q9NPC6 264 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TLR8Q9NR97 1041 aaKnown RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 LAMB4A4D0S4 1761 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 BBIP1A8MTZ0 92 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 FAM58BPP0C7Q3 252 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 LCP1P13796 627 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 NUP62P37198 522 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 PDIA6Q15084 440 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ATP6AP1LQ52LC2 224 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 EID3Q8N140 333 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 PPP1R14BQ96C90 147 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TMEM176AQ96HP8 235 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■□□□□ 8.6
SEC16A-202ENST00000290037 HMG20AQ9NP66 347 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TCF7L2Q9NQB0 619 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 RNF112Q9ULX5 631 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ZNF510Q9Y2H8 683 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 CCDC154A6NI56 674 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 SLC44A4Q53GD3 710 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 HES6Q96HZ4 224 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ATAD3AQ9NVI7 634 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 CYP2A7P20853 494 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 CCR1P32246 355 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 GUCY1A2P33402 732 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ZMYM5Q9UJ78 669 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 PCDHB7Q9Y5E2 793 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 RAD51BO15315 384 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 GLP2RO95838 553 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 ITGA2P17301 1181 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 STAT5AP42229 794 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 MAGEA10P43363 369 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 GRB10Q13322 594 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 SPDYAQ5MJ70 313 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 CHAMP1Q96JM3 812 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 OSBPL10Q9BXB5 764 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 RPRD1BQ9NQG5 326 aaKnown RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 UBP1Q9NZI7 540 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 RPS6KA6Q9UK32 745 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 PRG3Q9Y2Y8 225 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 PRAMEF22A3QJZ6 481 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 SLC9A3R1O14745 358 aaPredicted RBP15.18■□□□□ 0.02
SEC16A-202ENST00000290037 MED26O95402 600 aa15.18■□□□□ 0.02
SEC16A-202ENST00000290037 KITP10721 976 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms