RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 LHX5Q9H2C1 402 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 PDLIM7Q9NR12 457 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 ASNSD1Q9NWL6 643 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 STK39Q9UEW8 545 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 PTPRJQ12913 1337 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 SMCHD1A6NHR9 2005 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
CHMP2B-201ENST00000263780 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 AVILO75366 819 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CD48P09326 243 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CDK4P11802 303 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 NCF2P19878 526 aaPredicted RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 XRRA1Q6P2D8 792 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 C16orf89Q6UX73 402 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ZCCHC23Q6ZST2 131 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 WDTC1Q8N5D0 677 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 SLC4A11Q8NBS3 891 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ZFP28Q8NHY6 868 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 NIF3L1Q9GZT8 377 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 RHBDL2Q9NX52 303 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 AK5Q9Y6K8 562 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 TRMUO75648 421 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CRTAMO95727 393 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 TRUB2O95900 331 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 COX4I1P13073 169 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CREB5Q02930 508 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 GRM1Q13255 1194 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 INSCQ1MX18 579 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 TCHHL1Q5QJ38 904 aaPredicted RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ZNF554Q86TJ5 538 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ADGRF2Q8IZF7 708 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 ARFGAP1Q8N6T3 406 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CLEC4DQ8WXI8 215 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 HSPH1Q92598 858 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 CISHQ9NSE2 258 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 GABBR1Q9UBS5 961 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
CHMP2B-201ENST00000263780 SLC15A5A6NIM6 579 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CSH1P0DML2 217 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CSH2P0DML3 217 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 FGF3P11487 239 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PTGER2P43116 358 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 MYLK3Q32MK0 819 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 SYTL5Q8TDW5 730 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 TRPC4APQ8TEL6 797 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 GAB3Q8WWW8 586 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 DLG3Q92796 817 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 GRIP2Q9C0E4 1043 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 DDX18Q9NVP1 670 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 TMOD2Q9NZR1 351 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PCSK1NQ9UHG2 260 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PCDHA11Q9Y5I1 949 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PCDHAC2Q9Y5I4 1007 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CDY2AQ9Y6F7 541 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 K7ERI5 159 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 NFIBO00712 420 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 MAFGO15525 162 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 KCNN4O15554 427 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PSAPP07602 524 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 THRAP10827 490 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 MIPP30301 263 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 SOX10P56693 466 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 WNT7BP56706 349 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PPIDQ08752 370 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 NAB1Q13506 487 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ADGRE1Q14246 886 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 PGM5Q15124 567 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 VPS72Q15906 364 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ERI1Q8IV48 349 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 JOSD2Q8TAC2 188 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 TFB1MQ8WVM0 346 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 SREK1Q8WXA9 508 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 CDKL2Q92772 493 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 SMYD2Q9NRG4 433 aa12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 AHDC1Q5TGY3 1603 aaPredicted RBP12.78□□□□□ -0.36
CHMP2B-201ENST00000263780 ITM2AO43736 263 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms