RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 LPIN3Q9BQK8 851 aa14.04□□□□□ -0.16
SGCA-201ENST00000262018 TSGA10Q9BZW7 698 aa14.04□□□□□ -0.16
SGCA-201ENST00000262018 ASB7Q9H672 318 aa14.04□□□□□ -0.16
SGCA-201ENST00000262018 SLC6A14Q9UN76 642 aa14.04□□□□□ -0.16
SGCA-201ENST00000262018 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
SGCA-201ENST00000262018 PTPRJQ12913 1337 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 CITO14578 2027 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 PI4KAP42356 2102 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 MTMR11A4FU01 709 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 OR6C75A6NL08 312 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 FOXN3O00409 490 aaPredicted RBP14.03□□□□□ -0.16
SGCA-201ENST00000262018 FANCGO15287 622 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 KRT86O43790 486 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 C1QL1O75973 258 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 OAZ2O95190 189 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 FTH1P19P0C7X4 201 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 CD59P13987 128 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 PLA2G2AP14555 144 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 TNNI1P19237 187 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 AVPR1AP37288 418 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 MAGEA1P43355 309 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 SEC13P55735 322 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 PTK2Q05397 1052 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 GFPT1Q06210 699 aaPredicted RBP14.03□□□□□ -0.16
SGCA-201ENST00000262018 PDGFRLQ15198 375 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 TAF12Q16514 161 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 ARHGAP44Q17R89 818 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 CCDC122Q5T0U0 273 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 TDRD10Q5VZ19 366 aaKnown RBP14.03□□□□□ -0.16
SGCA-201ENST00000262018 LYSMD4Q5XG99 296 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 WDR49Q8IV35 697 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 CPA6Q8N4T0 437 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 MINDY1Q8N5J2 469 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 OR2I1PQ8NGU4 316 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 USP13Q92995 863 aaPredicted RBP14.03□□□□□ -0.16
SGCA-201ENST00000262018 SPACA7Q96KW9 195 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 WDR24Q96S15 920 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 OXCT2Q9BYC2 517 aaPredicted RBP14.03□□□□□ -0.16
SGCA-201ENST00000262018 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 NENFQ9UMX5 172 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 PCDHB9Q9Y5E1 797 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 ATP8B3O60423 1300 aa14.03□□□□□ -0.16
SGCA-201ENST00000262018 A0A087X0T9 212 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 LACTBL1A8MY62 500 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 SH3BP5O60239 455 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 VNN1O95497 513 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 HLA-DRAP01903 254 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 FAM228BP0C875 321 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.16
SGCA-201ENST00000262018 ITPKAP23677 461 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 CASQ1P31415 396 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 P2RY2P41231 377 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 DPP6P42658 865 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 MFAP3P55082 362 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 KIF5AQ12840 1032 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 VEPH1Q14D04 833 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 DUOXA1Q1HG43 343 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 C2orf27AQ580R0 203 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 C10orf76Q5T2E6 689 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 LMBRD2Q68DH5 695 aaPredicted RBP14.02□□□□□ -0.16
SGCA-201ENST00000262018 CCDC33Q8N5R6 958 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 FRMD1Q8N878 549 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 MAB21L3Q8N8X9 362 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 USP33Q8TEY7 942 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 SHC3Q92529 594 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 FAM212AQ96EL1 285 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 KREMEN1Q96MU8 473 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 SEPT5Q99719 369 aaPredicted RBP14.02□□□□□ -0.16
SGCA-201ENST00000262018 SYT11Q9BT88 431 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 IRX2Q9BZI1 471 aaPredicted RBP14.02□□□□□ -0.16
SGCA-201ENST00000262018 ECT2Q9H8V3 914 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 LUC7LQ9NQ29 371 aaKnown RBP14.02□□□□□ -0.16
SGCA-201ENST00000262018 TDP1Q9NUW8 608 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 TRIM10Q9UDY6 481 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 PILRBQ9UKJ0 227 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 DERAQ9Y315 318 aa14.02□□□□□ -0.16
SGCA-201ENST00000262018 UQCRHLA0A096LP55 91 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 M0QZQ0 153 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 RIOK3O14730 519 aaKnown RBP14.01□□□□□ -0.17
SGCA-201ENST00000262018 XPOTO43592 962 aaKnown RBP14.01□□□□□ -0.17
SGCA-201ENST00000262018 ALDH1A2O94788 518 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 UQCRHP07919 91 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 PIK3CAP42336 1068 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 CDR1P51861 262 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 GCNT1Q02742 428 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ZNF569Q5MCW4 686 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ENOSF1Q7L5Y1 443 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 ZNF605Q86T29 641 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 VPS36Q86VN1 386 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 NT5DC4Q86YG4 428 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 FAM71AQ8IYT1 594 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 TMEM130Q8N3G9 435 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 PPM1KQ8N3J5 372 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
SGCA-201ENST00000262018 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms