RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 OR6Y1Q8NGX8 325 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 FAM172AQ8WUF8 416 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 PPP1R14BQ96C90 147 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 MRRFQ96E11 262 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 FDXACB1Q9BRP7 624 aaPredicted RBP11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 WWP1Q9H0M0 922 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 PDZD7Q9H5P4 517 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 TUT1Q9H6E5 874 aaKnown RBP11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 DERAQ9Y315 318 aa11.2□□□□□ -0.62
CHRNA1-201ENST00000261007 LACTBL1A8MY62 500 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 H3BRJ5 948 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 GPR25O00155 361 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TMCC1O94876 653 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 KRT7P08729 469 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CCDC166P0CW27 439 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 RGS2P41220 211 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 IRX4P78413 519 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 RBP5P82980 135 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TMEM132DQ14C87 1099 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 DGKDQ16760 1214 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 HADHQ16836 314 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 FAM110CQ1W6H9 321 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CAPN12Q6ZSI9 719 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SH2D5Q6ZV89 423 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SPATA24Q86W54 205 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ALDH16A1Q8IZ83 802 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 C1orf127Q8N9H9 656 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 DGCR14Q96DF8 476 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 MTBPQ96DY7 904 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 MCEEQ96PE7 176 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CYTH2Q99418 400 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 C16orf70Q9BSU1 422 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 MINDY3Q9H8M7 445 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 S100A14Q9HCY8 104 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 PTTG2Q9NZH5 202 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 NXF1Q9UBU9 619 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC7A8Q9UHI5 535 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SIX4Q9UIU6 781 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 USTQ9Y2C2 406 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SLC15A5A6NIM6 579 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 BAG2O95816 211 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 HMGCRP04035 888 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 KRT1P04264 644 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 NFICP08651 508 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 VDRP11473 427 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ETS1P14921 441 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CD19P15391 556 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 BGNP21810 368 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SSTR1P30872 391 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 OSTNP61366 133 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CFAP157Q5JU67 520 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 C1orf146Q5VVC0 180 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 JADE1Q6IE81 842 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 GPR142Q7Z601 462 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 PLEKHH3Q7Z736 793 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 DHDDSQ86SQ9 333 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TTC7BQ86TV6 843 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 RASSF3Q86WH2 238 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 PALM2Q8IXS6 379 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TTC13Q8NBP0 860 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 NLRP7Q8WX94 980 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 APBB2Q92870 758 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 ACAP3Q96P50 834 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TSPAN18Q96SJ8 248 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 TTC1Q99614 292 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 THTPAQ9BU02 230 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 CCDC106Q9BWC9 280 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 KLHL4Q9C0H6 718 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 EBF3Q9H4W6 596 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 SUDS3Q9H7L9 328 aaPredicted RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 DNAAF2Q9NVR5 837 aaKnown RBP11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 GALNT8Q9NY28 637 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 EVPLQ92817 2033 aa11.19□□□□□ -0.62
CHRNA1-201ENST00000261007 FAM237BA0A1B0GVD1 139 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 I3L4J1 428 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ZSCAN9O15535 394 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 PEX1O43933 1283 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 OPHN1O60890 802 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 CILPO75339 1184 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 CAPN15O75808 1086 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ITGB3P05106 788 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 ENO1P06733 434 aaKnown RBP11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 GJB1P08034 283 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 MMP3P08254 477 aa11.18□□□□□ -0.62
CHRNA1-201ENST00000261007 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms