RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 BTG3Q14201 252 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MAP1SQ66K74 1059 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 NT5DC3Q86UY8 548 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MCOLN2Q8IZK6 566 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 LGI2Q8N0V4 545 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 KIF2BQ8N4N8 673 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FAM136AQ96C01 138 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CELF6Q96J87 481 aaKnown RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 P2RX7Q99572 595 aaKnown RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 HPSEQ9Y251 543 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 ADGRB2O60241 1585 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CCT8L1PA6NM43 557 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 IGF2BP3O00425 579 aaKnown RBP eCLIP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 GZMAP12544 262 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 KCNA3P22001 575 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MCL1Q07820 350 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 OVGP1Q12889 678 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CYLC2Q14093 348 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TRIP4Q15650 581 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TRIM69Q86WT6 500 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 SUGP1Q8IWZ8 645 aaKnown RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 EMC1Q8N766 993 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TADA1Q96BN2 335 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PGLYRP2Q96PD5 576 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 ANKRD6Q9Y2G4 727 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 WDR27A2RRH5 827 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FAM86B1E9PN63 330 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 NDUFB5O43674 189 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 IGSF6O95976 241 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FAM86B2P0C5J1 330 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 RRM1P23921 792 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 YWHAQP27348 245 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 HALP42357 657 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 SGCGQ13326 291 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 NFYCQ13952 458 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 VGLL4Q14135 290 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CSHL1Q14406 222 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 STARD3Q14849 445 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TRIM60Q495X7 471 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PDPK2PQ6A1A2 396 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MTSS1LQ765P7 747 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 REXO1L1PQ8IX06 675 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TRAPPC12Q8WVT3 735 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PADI4Q9UM07 663 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TDRKHQ9Y2W6 561 aaKnown RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 FRMPD4Q14CM0 1322 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 C3P01024 1663 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MGAT4DA6NG13 374 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PIK3CDO00329 1044 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CCNT2O60583 730 aaKnown RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 AKAP3O75969 853 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 RBP1P09455 135 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 ITGB6P18564 788 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 PLIN5Q00G26 463 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 CCDC142Q17RM4 750 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 OTOP1Q7RTM1 612 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 GLT6D1Q7Z4J2 308 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 TFAP2DQ7Z6R9 452 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 NT5DC4Q86YG4 428 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 SERPINB11Q96P15 392 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 DCLK3Q9C098 648 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 HMX1Q9NP08 348 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 DMAP1Q9NPF5 467 aaPredicted RBP8.95□□□□□ -0.98
PTCD3-201ENST00000254630 KCNQ5Q9NR82 932 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 UMODL1Q5DID0 1318 aa8.95□□□□□ -0.98
PTCD3-201ENST00000254630 MAGEB16A2A368 324 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CCDC159P0C7I6 412 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CCND1P24385 295 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 OR1E1P30953 314 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 TUBP50607 506 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 SCNN1BP51168 640 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CREMQ03060 361 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 STX5Q13190 355 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 NFE2Q16621 373 aaPredicted RBP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 KCTD14Q9BQ13 255 aaPredicted RBP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 APOL2Q9BQE5 337 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 ELOVL4Q9GZR5 314 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 DDX4Q9NQI0 724 aaKnown RBP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CACNA2D2Q9NY47 1150 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 PNMA8BQ9ULN7 279 aaPredicted RBP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 NCKAP1Q9Y2A7 1128 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 SLITRK3O94933 977 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 DSG1Q02413 1049 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CELF3Q5SZQ8 465 aaKnown RBP8.94□□□□□ -0.98
PTCD3-201ENST00000254630 SEL1L3Q68CR1 1132 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 IQSEC1Q6DN90 963 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 TMEM154Q6P9G4 183 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CHMP1BQ7LBR1 199 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 GPAMQ9HCL2 828 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 UBP1Q9NZI7 540 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 GNG14A0A1W2PPG7 69 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 ALBP02768 609 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 THRAP10827 490 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 RAG1P15918 1043 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 BEX3Q00994 111 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 CCNG2Q16589 344 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 FAM9CQ8IZT9 166 aa8.94□□□□□ -0.98
PTCD3-201ENST00000254630 NOA1Q8NC60 698 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms