RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 GPS2Q13227 327 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 EIF4EBP2Q13542 120 aaPredicted RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 CA9Q16790 459 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 TPGS2Q68CL5 300 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 DENND5BQ6ZUT9 1274 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 DDX53Q86TM3 631 aaKnown RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 SCAMP5Q8TAC9 235 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 P3H4Q92791 437 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 SNF8Q96H20 258 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 PKNOX2Q96KN3 472 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 KCTD15Q96SI1 283 aaPredicted RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 FMO2Q99518 471 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 HINFPQ9BQA5 517 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 TSPYL1Q9H0U9 437 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 SMOC2Q9H3U7 446 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 FAM204AQ9H8W3 233 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 PIGVQ9NUD9 493 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 ZDHHC18Q9NUE0 388 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 SPG21Q9NZD8 308 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 GRHL1Q9NZI5 618 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 CALCOCO1Q9P1Z2 691 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 MTRF1LQ9UGC7 380 aaKnown RBP14.75□□□□□ -0.05
SDF2-201ENST00000247020 FBXW11Q9UKB1 542 aa14.75□□□□□ -0.05
SDF2-201ENST00000247020 CFAP69A5D8W1 941 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 H3BRJ5 948 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 FGBP02675 491 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 KLRC2P26717 231 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 ADRA1BP35368 520 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 HCAR3P49019 387 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 TUFMP49411 452 aaKnown RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 GLUD2P49448 558 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 PITX1P78337 314 aaPredicted RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 HTRA4P83105 476 aaPredicted RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 CREMQ03060 361 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 FPGSQ05932 587 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 MMRN1Q13201 1228 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 MTMR3Q13615 1198 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 BRMS1LQ5PSV4 323 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 KIAA1841Q6NSI8 718 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 MSANTD2Q6P1R3 559 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 PSRC1Q6PGN9 363 aaPredicted RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 RSPO2Q6UXX9 243 aaPredicted RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 RNF19BQ6ZMZ0 732 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 BZW1Q7L1Q6 419 aaKnown RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 GSTA5Q7RTV2 222 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 TAS1R1Q7RTX1 841 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 DDX42Q86XP3 938 aaKnown RBP eCLIP14.74□□□□□ -0.05
SDF2-201ENST00000247020 ATAD1Q8NBU5 361 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 PCDH19Q8TAB3 1148 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 DQX1Q8TE96 717 aaKnown RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 RIN2Q8WYP3 895 aaPredicted RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 ART4Q93070 314 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 B3GALT6Q96L58 329 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 VN1R3Q9BXE9 311 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 PCDH9Q9HC56 1237 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 GPATCH2LQ9NWQ4 482 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 DDIT4Q9NX09 232 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.74□□□□□ -0.054e-6■□□□□ 9
SDF2-201ENST00000247020 AFF4Q9UHB7 1163 aaKnown RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 MAFFQ9ULX9 164 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 SNX24Q9Y343 169 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 CDY1Q9Y6F8 540 aa14.74□□□□□ -0.05
SDF2-201ENST00000247020 MRPL42Q9Y6G3 142 aaKnown RBP14.74□□□□□ -0.05
SDF2-201ENST00000247020 IRAK2O43187 625 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 KRT14P02533 472 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 ACRP10323 421 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 ATF2P15336 505 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 STIP1P31948 543 aaKnown RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 HTR7P34969 479 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 HSPA9P38646 679 aaKnown RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 DYNLT1P63172 113 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 ROR1Q01973 937 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 NME3Q13232 169 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 XRCC4Q13426 336 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 TRADDQ15628 312 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 PPP6R3Q5H9R7 873 aaPredicted RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 PRSS55Q6UWB4 352 aaPredicted RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 PQLC3Q8N755 202 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 PLD5Q8N7P1 536 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 HAUS1Q96CS2 278 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 CSPG4P5Q96PW8 444 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 YME1L1Q96TA2 773 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 FOXP3Q9BZS1 431 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 TRIM31Q9BZY9 425 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 WDCPQ9H6R7 721 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 CLIC5Q9NZA1 410 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 OGFRQ9NZT2 677 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 HPCAL4Q9UM19 191 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 WDR27A2RRH5 827 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 GJB5O95377 273 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 VNN2O95498 520 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 FAM153BP0C7A2 387 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 IVDP26440 423 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 YWHAQP27348 245 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 CDR1P51861 262 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 ARPP19P56211 112 aa14.73□□□□□ -0.05
SDF2-201ENST00000247020 EIF3EP60228 445 aaKnown RBP14.73□□□□□ -0.05
SDF2-201ENST00000247020 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms