RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 MCEMP1Q8IX19 187 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RNF25Q96BH1 459 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 DESI2Q9BSY9 194 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 TRHDEQ9UKU6 1024 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 WARSP23381 471 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 FXR1P51114 621 aaKnown RBP eCLIP7.63□□□□□ -1.19
MED28-201ENST00000237380 FXR2P51116 673 aaKnown RBP eCLIP7.63□□□□□ -1.19
MED28-201ENST00000237380 LRRC49Q8IUZ0 686 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RBBP8NLQ8NC74 664 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 C1orf131Q8NDD1 294 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 ATXN3LQ9H3M9 355 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ARHGEF3Q9NR81 526 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 BARX2Q9UMQ3 279 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 ADGRA2Q96PE1 1338 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 AGLP35573 1532 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CD3EAPO15446 510 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 FGF10O15520 208 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 MFAP3LO75121 409 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RBP3P10745 1247 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CAP2P40123 477 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RAB2AP61019 212 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ACAP1Q15027 740 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 TRIP13Q15645 432 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 WDR49Q8IV35 697 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 PPIL6Q8IXY8 311 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 LY9Q9HBG7 655 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 GNG14A0A1W2PPG7 69 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 TLL1O43897 1013 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 NUDT14O95848 222 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 GSPT1P15170 499 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 U2AF2P26368 475 aaKnown RBP eCLIP7.63□□□□□ -1.19
MED28-201ENST00000237380 RPA1P27694 616 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RPL9P32969 192 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 FMO5P49326 533 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 BST2Q10589 180 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 MACC1Q6ZN28 852 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 SH3BP5LQ7L8J4 393 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 IPMKQ8NFU5 416 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 TGS1Q96RS0 853 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 ARHGAP28Q9P2N2 729 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 SSU72P8A0A1W2PR75 194 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 NDUFB10O96000 172 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CHRNA5P30532 468 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 STX3Q13277 289 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 DAB2IPQ5VWQ8 1189 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 DHX40Q8IX18 779 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 FEZF2Q8TBJ5 459 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CAPSLQ8WWF8 208 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ELOVL6Q9H5J4 265 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ANKRD6Q9Y2G4 727 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 COLEC10Q9Y6Z7 277 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RNF103O00237 685 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CTNNB1P35222 781 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CLK1P49759 484 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 SMIM11AP58511 58 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 C2orf54Q08AI8 447 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 MYBPC2Q14324 1141 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RCN1Q15293 331 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ADRM1Q16186 407 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ATXN7L2Q5T6C5 722 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 CCDC80Q76M96 950 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 NIPA1Q7RTP0 329 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 APLFQ8IW19 511 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 CENPLQ8N0S6 344 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 UHMK1Q8TAS1 419 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 VAT1Q99536 393 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 RANBP17Q9H2T7 1088 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 SMYD3Q9H7B4 428 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 TBX20Q9UMR3 447 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 NOVA2Q9UNW9 492 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 TNPO3Q9Y5L0 923 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 BLKP51451 505 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CACNB3P54284 484 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 DGKKQ5KSL6 1271 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 FAM220AQ7Z4H9 259 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 PRPF39Q86UA1 669 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 PIH1D3Q9NQM4 214 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 ZMYND8Q9ULU4 1186 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 POTEMA6NI47 508 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 LYNP07948 512 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 CENPTQ96BT3 561 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ILKAPQ9H0C8 392 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 PRKAB2O43741 272 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 SP100P23497 879 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 RPS7P62081 194 aaKnown RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 INAQ16352 499 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 SLC25A24Q6NUK1 477 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 DPY30Q9C005 99 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 PCDH10Q9P2E7 1040 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 FBXL5Q9UKA1 691 aa7.63□□□□□ -1.19
MED28-201ENST00000237380 ZNF214Q9UL59 606 aaPredicted RBP7.63□□□□□ -1.19
MED28-201ENST00000237380 PPRC1Q5VV67 1664 aaKnown RBP7.62□□□□□ -1.19
MED28-201ENST00000237380 PLA2G6O60733 806 aa7.62□□□□□ -1.19
MED28-201ENST00000237380 RAMP2O60895 175 aa7.62□□□□□ -1.19
MED28-201ENST00000237380 DNTTP04053 509 aa7.62□□□□□ -1.19
MED28-201ENST00000237380 PCNAP12004 261 aa7.62□□□□□ -1.19
MED28-201ENST00000237380 TSNQ15631 228 aaKnown RBP7.62□□□□□ -1.19
MED28-201ENST00000237380 ATP6AP1LQ52LC2 224 aa7.62□□□□□ -1.19
MED28-201ENST00000237380 TFDP3Q5H9I0 405 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms