RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PSEN2P49810 448 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 IFI35P80217 286 aaPredicted RBP19.38■□□□□ 0.69
MBD3-201ENST00000156825 KLC1Q07866 573 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 LRRN4Q8WUT4 740 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 EXOSC4Q9NPD3 245 aaKnown RBP19.38■□□□□ 0.69
MBD3-201ENST00000156825 RASSF10A6NK89 507 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 BTNL9Q6UXG8 535 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 CATSPER1Q8NEC5 780 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 THAP11Q96EK4 314 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 HES6Q96HZ4 224 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 ASB7Q9H672 318 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 DSEQ9UL01 958 aa19.38■□□□□ 0.69
MBD3-201ENST00000156825 PSMD10O75832 226 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 MAPTP10636 758 aaKnown RBP19.37■□□□□ 0.69
MBD3-201ENST00000156825 AKR1A1P14550 325 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 CPA3P15088 417 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 RCN1Q15293 331 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 TMEM154Q6P9G4 183 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 SUGP1Q8IWZ8 645 aaKnown RBP19.37■□□□□ 0.69
MBD3-201ENST00000156825 ADAM2Q99965 735 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 OSGEPL1Q9H4B0 414 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 LZTS1Q9Y250 596 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 GAKO14976 1311 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 TRPC5OSA6NMA1 111 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 GUCA1CO95843 209 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 WDR48Q8TAF3 677 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 ZFYVE19Q96K21 471 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 ZNF556Q9HAH1 456 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 TBX4P57082 545 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 TBX2Q13207 712 aaPredicted RBP19.37■□□□□ 0.69
MBD3-201ENST00000156825 ATP13A4Q4VNC1 1196 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 SLC39A12Q504Y0 691 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 VPS37AQ8NEZ2 397 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 ZNF333Q96JL9 665 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 UBE2OQ9C0C9 1292 aaKnown RBP19.37■□□□□ 0.69
MBD3-201ENST00000156825 PCDH9Q9HC56 1237 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 CD248Q9HCU0 757 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 EPHB3P54753 998 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 KCNT2Q6UVM3 1135 aa19.37■□□□□ 0.69
MBD3-201ENST00000156825 GLRA2P23416 452 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 ITGA9Q13797 1035 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 SH3RF1Q7Z6J0 888 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 VTA1Q9NP79 307 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 KCNMB3Q9NPA1 279 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 RIPK2O43353 540 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 GLP2RO95838 553 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 SCNN1GP51170 649 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 HORMAD1Q86X24 394 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 MAGEB18Q96M61 343 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 OLFM3Q96PB7 478 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 ULBP1Q9BZM6 244 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 DTNAQ9Y4J8 743 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 PCDHB5Q9Y5E4 795 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 RAMP2O60895 175 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 VAPBO95292 243 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 HMGCRP04035 888 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 RAG1P15918 1043 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 YBX3P16989 372 aaKnown RBP eCLIP19.36■□□□□ 0.69
MBD3-201ENST00000156825 ZNF268Q14587 947 aaPredicted RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 AARS2Q5JTZ9 985 aaKnown RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 NAT9Q9BTE0 207 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 FRMD8P1Q9BZ68 369 aaPredicted RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 NKRFO15226 690 aaKnown RBP eCLIP19.36■□□□□ 0.696e-7■■■□□ 14.8
MBD3-201ENST00000156825 PIAS1O75925 651 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 ETS1P14921 441 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 MLH1P40692 756 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 TNFSF9P41273 254 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 HDAC4P56524 1084 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 BTG3Q14201 252 aaPredicted RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 TRIM48Q8IWZ4 208 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 EIF2AQ9BY44 585 aaKnown RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 DNAJC18Q9H819 358 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 CAAP1Q9H8G2 361 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 CDV3Q9UKY7 258 aaKnown RBP19.36■□□□□ 0.69
MBD3-201ENST00000156825 VPS9D1Q9Y2B5 631 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 SIK3Q9Y2K2 1263 aa19.36■□□□□ 0.69
MBD3-201ENST00000156825 CCND1P24385 295 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 RAP1GDS1P52306 607 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 OAZ1P54368 228 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 SEL1L3Q68CR1 1132 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 UGT3A1Q6NUS8 523 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 NIPA1Q7RTP0 329 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 CCNJLQ8IV13 435 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 EPS8L1Q8TE68 723 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 HTR3CQ8WXA8 447 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 TMEM120AQ9BXJ8 343 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 PORCNQ9H237 461 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 NOD2Q9HC29 1040 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 PCDHA3Q9Y5H8 950 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 NFICP08651 508 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 ITGALP20701 1170 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 RBL1P28749 1068 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 PRIM2P49643 509 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 SKOR1P84550 965 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 SPATA16Q9BXB7 569 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 UBXN6Q9BZV1 441 aa19.35■□□□□ 0.69
MBD3-201ENST00000156825 TLR8Q9NR97 1041 aaKnown RBP19.35■□□□□ 0.69
MBD3-201ENST00000156825 ENO4A6NNW6 628 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms