RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 GPSM2P81274 684 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 BNIP2Q12982 314 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 GLB1LQ6UWU2 654 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CCNI2Q6ZMN8 369 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 DAGLBQ8NCG7 672 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 OR52L1Q8NGH7 329 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 SLC35G2Q8TBE7 412 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 TRIM2Q9C040 744 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 NECTIN3Q9NQS3 549 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ARHGAP28Q9P2N2 729 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 KIAA1217Q5T5P2 1943 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CYP2D6P10635 497 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PRKAR1AP10644 381 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CYP2A7P20853 494 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PTPN3P26045 913 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 USP10Q14694 798 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 TTC23Q5W5X9 447 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PLEKHA7Q6IQ23 1121 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CYB5D1Q6P9G0 228 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 B3GNT6Q6ZMB0 384 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PID1Q7Z2X4 250 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CENPLQ8N0S6 344 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 KANSL3Q9P2N6 904 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 SNX24Q9Y343 169 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ARIH1Q9Y4X5 557 aaPredicted RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 MBD5Q9P267 1494 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ALKQ9UM73 1620 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CACNA1DQ01668 2161 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 URADA6NGE7 173 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 MYO1GB0I1T2 1018 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CCDC166P0CW27 439 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CLCN2P51788 898 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ALDH18A1P54886 795 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 GEMP55040 296 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 HABP4Q5JVS0 413 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 FBXL16Q8N461 479 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF180Q9UJW8 692 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 A0A087X1B8 175 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 VIL1P09327 827 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 DARSP14868 501 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 BCAMP50895 628 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 CYP24A1Q07973 514 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 MPP3Q13368 585 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 SLC26A11Q86WA9 606 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 IL22Q9GZX6 179 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 L2HGDHQ9H9P8 463 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 SEC31BQ9NQW1 1179 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PCDHA6Q9UN73 950 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PCDHA8Q9Y5H6 950 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 TTC26A0AVF1 554 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 PSMD11O00231 422 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 LSM1O15116 133 aaKnown RBP6.24□□□□□ -1.41
VPS13D-201ENST00000011700 NOS3P29474 1203 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 SPATA33Q96N06 139 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 GPR63Q9BZJ6 419 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 DMTF1Q9Y222 760 aa6.24□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF521Q96K83 1311 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 USP31Q70CQ4 1352 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SKAP2O75563 359 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 KITP10721 976 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MAGEA4P43358 317 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PTH1RQ03431 593 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SMARCB1Q12824 385 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF827Q17R98 1081 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SBK1Q52WX2 424 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 GRTP1Q5TC63 336 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 KCTD1Q719H9 257 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CHST13Q8NET6 341 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CD101Q93033 1021 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PRMT6Q96LA8 375 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 STRBPQ96SI9 672 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 EIF2AK1Q9BQI3 630 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 OSBPL11Q9BXB4 747 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 POLR3FQ9H1D9 316 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 LY9Q9HBG7 655 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 NOD2Q9HC29 1040 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TCF7L2Q9NQB0 619 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ATPIF1Q9UII2 106 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MRTO4Q9UKD2 239 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CKAP5Q14008 2032 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MLYCDO95822 493 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CSH1P0DML2 217 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CSH2P0DML3 217 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ENO3P13929 434 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZDHHC20Q5W0Z9 365 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CXXC5Q7LFL8 322 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 LONP2Q86WA8 852 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 USP33Q8TEY7 942 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PROX1Q92786 737 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 NMRAL1Q9HBL8 299 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZBTB12Q9Y330 459 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RIMS1Q86UR5 1692 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ASTN2O75129 1339 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 DEPDC5O75140 1603 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PRMT5O14744 637 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 S100A6P06703 90 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CRKLP46109 303 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CDH4P55283 916 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms