RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Gm2897K7N6T7 172 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 RxrbP28704 520 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Alox15P39654 663 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Shmt1P50431 478 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Msx3P70354 204 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mcm9Q2KHI9 1134 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ripply1Q2WG77 201 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rnf180Q3U827 592 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Bcar1Q61140 874 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Capn3Q64691 821 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Otud6aQ6IE21 290 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dennd2cQ6P9P8 914 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc38a7Q8BWH0 463 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pak5Q8C015 719 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm3411Q8C7R2 150 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zdhhc3Q8R173 299 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 KlbQ99N32 1043 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 CygbQ9CX80 190 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Trpc4Q9QUQ5 974 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rbck1Q9WUB0 508 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Plxnb2B2RXS4 1842 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rnf19bA2A7Q9 732 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Clca3bE9PUL3 1044 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rtn2O70622 471 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Scg3P47867 471 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Igfbp4P47879 254 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Prdx5P99029 210 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sox8Q04886 464 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Micall2Q3TN34 1009 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Eif2b5Q8CHW4 717 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Serpinb10Q8K1K6 397 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr393Q8VGR6 312 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pofut2Q8VHI3 429 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Plcb4Q91UZ1 1175 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rmi1Q9D4G9 616 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pgap3A2A559 320 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1305A2AVW3 312 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Celf5D3Z4T1 395 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Farp1F8VPU2 1048 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ass1P16460 412 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Vav1P27870 845 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pnpla5Q32LZ8 432 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem26Q3UP23 366 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ankrd34bQ3UUF8 508 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fam198aQ3UY90 562 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Znf512Q69Z99 562 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dclk2Q6PGN3 756 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cand2Q6ZQ73 1235 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Celf6Q7TN33 460 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mrgprb8Q7TN51 330 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmco6Q8BQX5 494 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 SgczQ8BX51 311 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ccdc90bQ8C3X2 256 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr449Q8VGW8 311 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Npm3Q9CPP0 175 aaKnown RBP10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dnaaf1Q9D2H9 634 aa10.03□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Smim10l2aA0A0B4J1F8 78 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm7086A0A1W2P766 342 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Per1O35973 1291 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ccnd3P30282 292 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Arl1P61211 181 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 YwhazP63101 245 aaKnown RBP10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Psmb4P99026 264 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 N4bp1Q6A037 893 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Uts2bQ765I1 113 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Stk40Q7TNL3 435 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1415Q7TQS4 311 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 March4Q80TE3 409 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Elac2Q80Y81 831 aaKnown RBP10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tdp1Q8BJ37 609 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lrif1Q8CDD9 755 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tp53inp2Q8CFU8 221 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gpc3Q8CFZ4 579 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mark4Q8CIP4 752 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 HpdlQ8K248 371 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc35f5Q8R314 524 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 TgdsQ8VDR7 355 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr1416Q8VGU4 312 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ttc30a1Q99J38 664 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 GmprQ9DCZ1 345 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cyp4f14Q9EP75 524 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Stx12Q9ER00 274 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 RalbQ9JIW9 206 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Iigp1Q9QZ85 413 aa10.02□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Spata31d1aE9QA35 1336 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tubb1A2AQ07 451 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Erich2E9Q1A6 463 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 CenpaO35216 134 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 ChrngP04760 519 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Pgk2P09041 417 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Atxn10P28658 475 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Msr1P30204 458 aaKnown RBP10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 MipP51180 263 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Scarf2P59222 833 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Tff2Q03404 129 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Q14AM7 275 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Rcsd1Q3UZA1 412 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 ADGRF3Q58Y75 991 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 Ndrg1Q62433 394 aa10.02□□□□□ -0.81
Pcdh1-201ENSMUST00000057185 RfflQ6ZQM0 377 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms