RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Abhd10Q6PE15 297 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Trim35Q8C006 501 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Q8CD60 292 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Snrnp27Q8K194 155 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Mcoln2Q8K595 566 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Ssx2ipQ8VC66 615 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Ndufaf1Q9CWX2 328 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Tspan17Q9D7W4 270 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 NvlQ9DBY8 855 aaKnown RBP15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 ParvbQ9ES46 365 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Neu2Q9JMH3 379 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 RecqlQ9Z129 648 aa15.27■□□□□ 0.04
Ushbp1-201ENSMUST00000049184 Gm3173A6NAS3 172 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Olfr652B9EHE6 318 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Gm3020E9Q3J7 150 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Gm2897K7N6T7 172 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Ckmt1P30275 418 aaKnown RBP15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Jak1P52332 1153 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 DmpkP54265 631 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Fam117bQ3U3E2 584 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Abhd15Q5F2F2 459 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Slc17a6Q8BLE7 582 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Tlk1Q8C0V0 766 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Gm3411Q8C7R2 150 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Stau2Q8CJ67 570 aaKnown RBP15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Sumf1Q8R0F3 372 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Vmn1r213Q8R278 384 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Smyd3Q9CWR2 428 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Ttc30bQ9CY00 664 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Rbp7Q9EPC5 134 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Ing2Q9ESK4 281 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Rfx5Q9JL61 658 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mpp5Q9JLB2 675 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Zscan12Q9Z1D7 501 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Cd320Q9Z1P5 260 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Taf1Q80UV9 1891 aa15.27■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mical3Q8CJ19 1993 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Prdm11A2AGX3 565 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Kifc5bE9PUA5 672 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Plk2P53351 682 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Msx2Q03358 267 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Sh3bp2Q06649 559 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 1810065E05RikQ5NC41 235 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 9930111J21Rik1Q5SVP0 844 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Sema5bQ60519 1093 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mpp4Q6P7F1 635 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Cgrrf1Q8BMJ7 332 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Arhgap28Q8BN58 729 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Arhgap25Q8BYW1 648 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Slco4a1Q8K078 723 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Armcx6Q8K3A6 301 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 C1qtnf12Q8R2Z0 308 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mul1Q8VCM5 352 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Dctn2Q99KJ8 402 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mageb3Q9D2H4 330 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Mrpl4Q9DCU6 294 aaKnown RBP15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Zmynd8A2A484 1235 aaKnown RBP15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Gm3371F7CQW8 167 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Tnfrsf11bO08712 401 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 AmacrO09174 381 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Nek2O35942 443 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Dnmt3aO88508 908 aaKnown RBP15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 LmnaP48678 665 aaKnown RBP15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Casp7P97864 303 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Sox10Q04888 466 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 DeptorQ570Y9 409 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Slc10a5Q5PT54 434 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Chst10Q6PGK7 356 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Zfp759Q7M6X3 721 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Q8BZE1 841 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Trub1Q8C0D0 338 aaKnown RBP15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 ClmnQ8C5W0 1052 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Trim32Q8CH72 655 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Slc22a19Q8VCA0 551 aa15.26■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Olfr839-ps1A0A1D5RMH6 312 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Olfr1145A2AVC7 325 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 InvsO89019 1062 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 PrkceP16054 737 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 InhbcP55104 352 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Fermt1P59113 677 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Kmt5aQ2YDW7 349 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Tgfbrap1Q3UR70 860 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Ttc9Q3V038 219 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Klhl14Q69ZK5 630 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Ggt6Q6PDE7 497 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Senp7Q8BUH8 1037 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Wdr27Q8C5V5 780 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Pcdhb10Q91VE5 797 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Glra3Q91XP5 464 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Cog2Q921L5 731 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Dpp3Q99KK7 738 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Lysmd3Q99LE3 305 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 CygbQ9CX80 190 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Gsdmdc1Q9D8T2 487 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Tbc1d20Q9D9I4 402 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Rad51ap2G3UW63 976 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Glb1P23780 647 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Arhgap17Q3UIA2 846 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Cog7Q3UM29 770 aa15.25■□□□□ 0.03
Ushbp1-201ENSMUST00000049184 Samhd1Q60710 627 aa15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms