RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Lamtor4Q8CF66 99 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Abcf3Q8K268 709 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Swi5Q8K3D3 89 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mtif2Q91YJ5 727 aaKnown RBP10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Oas1cQ924S2 362 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kif12Q9D2Z8 642 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Flvcr1B2RXV4 560 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hps1O08983 704 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rrm1P07742 792 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 PcnaP17918 261 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 NfiaQ02780 532 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lrrc47Q505F5 581 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hist2h2acQ64523 129 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hist2h2aa1Q6GSS7 130 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lsm8Q6ZWM4 96 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Atxn2lQ7TQH0 1049 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr1057Q7TR75 315 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nup107Q8BH74 926 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dnali1Q8BVN8 258 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 4932414N04RikQ8CEQ9 752 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Syt12Q920N7 421 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tdrd1Q99MV1 1172 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Katnal2Q9D3R6 539 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ssxb9A2BI93 185 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Marcksl1P28667 200 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Etv6P97360 485 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pou1f1Q00286 291 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gsdmc2Q2KHK6 480 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tp53i13Q5F267 385 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pcsk9Q80W65 694 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lrrc24Q8BHA1 521 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tarsl2Q8BLY2 790 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cpsf4Q8BQZ5 211 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Serpini2Q9JK88 405 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Acsl4Q9QUJ7 711 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sh2d3cQ9QZS8 854 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pdpk1Q9Z2A0 559 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 AlpiF8VPQ6 554 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rgs2O08849 211 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Shcbp1lQ3TTP0 639 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Txndc8Q69AB2 127 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Prkag3Q8BGM7 489 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ifi44Q8BV66 422 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfp263Q8CF60 680 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zbtb44Q8R0A2 453 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mmtag2Q99LX5 260 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fbxo32Q9CPU7 355 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hs6st1Q9QYK5 411 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fut8Q9WTS2 575 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ms4a14A0A087WSD2 1232 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Prdm12A2AJ77 365 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Syndig1A2ANU3 258 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rrm2P11157 390 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tmem247Q497K7 211 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gja3Q64448 417 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Adamts13Q769J6 1426 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Deup1Q7M6Y5 601 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Btnl1Q7TST0 509 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Actr8Q8R2S9 624 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Crb1Q8VHS2 1405 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm43518A0A0G2JGB6 165 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rbp1Q00915 135 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdk16Q04735 496 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sox10Q04888 466 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Alkbh5Q3TSG4 395 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 P3h1Q3V1T4 739 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pick1Q62083 416 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nr6a1Q64249 495 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdc14aQ6GQT0 603 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 EtnpplQ8BWU8 499 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Slc30a5Q8R4H9 761 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Exd2Q8VEG4 650 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Lrrc17Q9CXD9 443 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ttc37F8VPK0 1563 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 EXOC1LB9EK06 172 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 D830030K20RikE9PYQ5 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fbxl18E9PYR1 771 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vmn2r104E9Q2J5 860 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm8257E9Q8R3 264 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3043K7N693 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm16440K7N6G6 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm2244L7N2A3 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3278L7N2D2 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm8271L7N2E2 218 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdh8P97291 799 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfp217Q3U0X6 1041 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fam214aQ69ZK7 1075 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Antxr2Q6DFX2 487 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr297Q7TS07 310 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rbm22Q8BHS3 420 aaKnown RBP10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Bhmt2Q91WS4 363 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tada1Q99LM9 335 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tomm70Q9CZW5 611 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cul2Q9D4H8 745 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mrpl46Q9EQI8 283 aa10.1□□□□□ -0.79
Syne1-201ENSMUST00000041639 CtcflA2APF3 636 aa10.09□□□□□ -0.79
Syne1-201ENSMUST00000041639 FanceB8JJD6 213 aa10.09□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr292F8VQ84 308 aa10.09□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm17019K7N6W5 255 aa10.09□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cyp2d34L7N463 504 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 39.6 ms