RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Vmn2r74E9PW21 853 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Akap10O88845 662 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Csf1rP09581 977 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 C2P21180 760 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Rpl10aP53026 217 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Arid5aQ3U108 590 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pik3r5Q5SW28 871 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sema5bQ60519 1093 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 HnrnpdQ60668 355 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kpna1Q60960 538 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Arhgap30Q640N3 1101 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Btbd10Q80X66 475 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pkn2Q8BWW9 983 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 4932414N04RikQ8CEQ9 752 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Evi2bQ8VD58 444 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 BsndQ8VIM4 307 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Slc12a9Q99MR3 914 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ube4bQ9ES00 1173 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ropn1Q9ESG2 212 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Copg2Q9QXK3 871 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pkp3Q9QY23 797 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Smim10l2aA0A0B4J1F8 78 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Stra6O70491 670 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Faf1P54731 649 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Otol1Q4ZJM7 482 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Grm6Q5NCH9 871 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Scarf1Q5ND28 820 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CttnQ60598 546 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Catsper3Q80W99 395 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tmco6Q8BQX5 494 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dync1li1Q8R1Q8 523 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pex19Q8VCI5 299 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sorcs3Q8VI51 1219 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pcdhb21Q91V48 774 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Txnrd3Q99MD6 652 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mrps5Q99N87 432 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lsm7Q9CQQ8 103 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Krt6bQ9Z331 562 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mzf1S4R1L6 814 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm21964A0A1W2P7S4 437 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tmem45a2B7ZWJ5 289 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm21973F6WEZ7 68 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dcdc2bF7BCK0 340 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 SarsP26638 512 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trim75Q3UWZ0 467 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Smarcd1Q61466 515 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sh3gl2Q62420 352 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Parp6Q6P6P7 630 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Magee1Q6PCZ4 918 aaKnown RBP10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Nme5Q99MH5 211 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ubxn6Q99PL6 442 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gpr63Q9EQQ3 425 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Entpd5Q9WUZ9 427 aa10.6□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Gm43518A0A0G2JGB6 165 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sec14l1A8Y5H7 715 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PigrO70570 771 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Orm2P07361 207 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Sstr1P30873 391 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Man1a1P45700 655 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccna2P51943 422 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ugt1a2P70691 533 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pbxip1Q3TVI8 727 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ugt1a1Q63886 535 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Wee2Q66JT0 555 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mon1aQ6PDG8 556 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Tcaf3Q6QR59 914 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Phf8Q80TJ7 1023 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 IntS13Q8QZV7 732 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Clptm1Q8VBZ3 664 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mlc1Q8VHK5 382 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Eef1akmt2Q9D853 244 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Klrc2Q9WTJ9 238 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ambra1A2AH22 1300 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Dpy19l4A2AJQ3 722 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 DgkhD3YXJ0 1156 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Klf6O08584 283 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ptp4a2O70274 167 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Cdh16O88338 830 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lamp1P11438 406 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 PrkchP23298 683 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 CartptP56388 129 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Lhx5P61375 402 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pdss1Q33DR2 409 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Alkbh5Q3TSG4 395 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Pgrmc2Q80UU9 217 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Zdhhc14Q8BQQ1 489 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Trim14Q8BVW3 440 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ccser1Q8C0C4 895 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kif12Q9D2Z8 642 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam162aQ9D6U8 155 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 March8Q9DBD2 286 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 NvlQ9DBY8 855 aaKnown RBP10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Iigp1Q9QZ85 413 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Fam166bA2AIP0 273 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Kifc3O35231 824 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Mmp10O55123 476 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Ephb2P54763 986 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Clec4fP70194 548 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Itga4Q00651 1039 aa10.59□□□□□ -0.71
Ccdc40-201ENSMUST00000035935 Phc1Q64028 1012 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms