RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Acnat1A2AKK5 416 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cnbd1B1AWM0 430 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 AU015836B2RUM3 263 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Hnrnph3D3Z3N4 346 aaKnown RBP11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sclt1G5E861 688 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 JundP15066 341 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Xrcc5P27641 732 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 IvlP48997 467 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Mxi1P50540 228 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Specc1lQ2KN98 1118 aaKnown RBP11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Slc5a10Q5SWY8 596 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 BadQ61337 204 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Mef2dQ63943 514 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Q6PAC4 1279 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Arid5bQ8BM75 1188 aaKnown RBP11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Pdcl3Q8BVF2 240 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Abi3Q8BYZ1 367 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Afap1l1Q8BZI0 768 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sh3rf2Q8BZT2 735 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ldlrap1Q8C142 308 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 MmaaQ8C7H1 415 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Kctd2Q8CEZ0 266 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 NeproQ8R2U2 564 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cpa5Q8R4H4 436 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Usp15Q8R5H1 981 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cox18Q8VC74 331 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Pcdhb17Q91VD8 799 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 FtcdQ91XD4 541 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tm4sf5Q91XF2 196 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tc2nQ91XT6 489 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ola1Q9CZ30 396 aaKnown RBP11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Phf14Q9D4H9 881 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Dcaf6Q9DC22 876 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Xpo7Q9EPK7 1087 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Asap1Q9QWY8 1147 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sgk1Q9WVC6 431 aa11.86□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Gm13089A2AGW7 455 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Olfr1305A2AVW3 312 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Apol11aE9PZG0 334 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Dthd1E9PZX1 795 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Myo1eE9Q634 1107 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tpp1O89023 562 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Coro1aO89053 461 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 C4bpaP08607 469 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Senp1P59110 640 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ephx3Q3V1F8 367 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 KrtdapQ3V2T4 102 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Stip1Q60864 543 aaKnown RBP11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sema4cQ64151 834 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Slc6a17Q8BJI1 727 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Trpa1Q8BLA8 1125 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tmem87aQ8BXN9 555 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Klhl36Q8R124 613 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Pcdhgb4Q91XX6 912 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 PigxQ99LV7 254 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Htra2Q9JIY5 458 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 C1qtnf1Q9QXP7 281 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 M1apQ9Z0E1 529 aa11.85□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Fam81bA0A140LI28 432 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Znf804aA2AKY4 1200 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Fam43bA2AM80 330 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Gm4297D3YWB7 211 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Kctd18E0CZ26 429 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Fam184aE9PW83 1143 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Sp1O89090 784 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 AfpP02772 605 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cnr2P47936 347 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Rfx2P48379 717 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Chp1P61022 195 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Smpdl3aP70158 445 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Neurog1P70660 244 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Bcl2a1cQ0P538 128 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Naf1Q3UMQ8 489 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Hspa4Q61316 841 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Myo6Q64331 1265 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cyp3a13Q64464 503 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Txndc8Q69AB2 127 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Bfsp2Q6NVD9 416 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Fam102aQ78T81 392 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Olfr698Q7TRN4 311 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 CslQ80X68 466 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Znf750Q8BH05 703 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ubr7Q8BU04 425 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tmem145Q8C4U2 746 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tph2Q8CGV2 488 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Arhgap18Q8K0Q5 663 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tcp11l2Q8K1H7 517 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 IntS13Q8QZV7 732 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Tspan33Q8R3S2 283 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Oas1cQ924S2 362 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Cxxc1Q9CWW7 660 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Fam212aQ9CX62 282 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Ddx56Q9D0R4 546 aaKnown RBP11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Uchl3Q9JKB1 230 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Dnajc7Q9QYI3 494 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Adam23Q9R1V7 829 aa11.84□□□□□ -0.51
Ccdc28b-201ENSMUST00000030586 Znf106O88466 1888 aa11.83□□□□□ -0.52
Ccdc28b-201ENSMUST00000030586 Zscan4dA7KBS4 506 aa11.83□□□□□ -0.52
Ccdc28b-201ENSMUST00000030586 Tmem235B1AQL3 211 aa11.83□□□□□ -0.52
Ccdc28b-201ENSMUST00000030586 Zfp40B1B1D3 796 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms