RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 GPR155Q7Z3F1 870 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 CD302Q8IX05 232 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 KIAA1958Q8N8K9 716 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 KCNV2Q8TDN2 545 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 FOXJ1Q92949 421 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 KCNN1Q92952 543 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 BICD1Q96G01 975 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 ACCSQ96QU6 501 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
MECP2-226ENST00000640414 SLC6A17Q9H1V8 727 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 CPSF3Q9UKF6 684 aaKnown RBP12.23□□□□□ -0.45
MECP2-226ENST00000640414 PTPRQQ9UMZ3 2332 aa12.23□□□□□ -0.45
MECP2-226ENST00000640414 SMTNL1A8MU46 457 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 BECN2A8MW95 431 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 KPNA7A9QM74 516 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 H0YCG3 227 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 SLC9A3R1O14745 358 aaPredicted RBP12.22□□□□□ -0.45
MECP2-226ENST00000640414 IKBKBO14920 756 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 ACAT1P24752 427 aaKnown RBP12.22□□□□□ -0.45
MECP2-226ENST00000640414 NTSR1P30989 418 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 MATKP42679 507 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 SLC7A9P82251 487 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 MYL5Q02045 173 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 ALCAMQ13740 583 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 ZCWPW2Q504Y3 356 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 CCDC157Q569K6 752 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
MECP2-226ENST00000640414 C10orf76Q5T2E6 689 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 DHRS13Q6UX07 377 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 NAT16Q8N8M0 369 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
MECP2-226ENST00000640414 DNASE2BQ8WZ79 361 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 NXPE2Q96DL1 559 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 ACOX2Q99424 681 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 RNF38Q9H0F5 515 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 HSD3B7Q9H2F3 369 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 FANCLQ9NW38 375 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 SMPD4Q9NXE4 827 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.22□□□□□ -0.45
MECP2-226ENST00000640414 DERAQ9Y315 318 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 PCDHGB2Q9Y5G2 931 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 CPQQ9Y646 472 aa12.22□□□□□ -0.45
MECP2-226ENST00000640414 UBE4BO95155 1302 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 BICDL2A1A5D9 508 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 MEI4A8MW99 385 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 ANKRD63C9JTQ0 380 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 PDXKO00764 312 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.45
MECP2-226ENST00000640414 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
MECP2-226ENST00000640414 TNFSF14O43557 240 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 TULP3O75386 442 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 OLFM2O95897 454 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 PFKLP17858 780 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 SCP2P22307 547 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 LIG4P49917 911 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 SEMG2Q02383 582 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 PTPRNQ16849 979 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 CFAP221Q4G0U5 840 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 LY6G5CQ5SRR4 150 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 FOXR2Q6PJQ5 311 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 IL27RAQ6UWB1 636 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 ETFBKMTQ8IXQ9 262 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 SYCP3Q8IZU3 236 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 PDCL2Q8N4E4 241 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 HVCN1Q96D96 273 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 ACBD6Q9BR61 282 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 MSTO1Q9BUK6 570 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 SRRTQ9BXP5 876 aaKnown RBP12.21□□□□□ -0.45
MECP2-226ENST00000640414 MIR1-1HGQ9H1L0 117 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
MECP2-226ENST00000640414 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
MECP2-226ENST00000640414 DPP3Q9NY33 737 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 CFAP97Q9P2B7 532 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 DNMT3LQ9UJW3 386 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 TRAF3IP3Q9Y228 551 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 C2CD2Q9Y426 696 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 NFE2L3Q9Y4A8 694 aa12.21□□□□□ -0.45
MECP2-226ENST00000640414 MYH11P35749 1972 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 TISP43B9A030 160 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 HNRNPDLO14979 420 aaKnown RBP12.2□□□□□ -0.46
MECP2-226ENST00000640414 TRIM24O15164 1050 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 CLIC2O15247 247 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 CD6P30203 668 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 USP46P62068 366 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 KCNC4Q03721 635 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 GAD2Q05329 585 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 LRRC63Q05C16 580 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 SV2CQ496J9 727 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 IRF2BP1Q8IU81 584 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
MECP2-226ENST00000640414 CSGALNACT2Q8N6G5 542 aa12.2□□□□□ -0.46
MECP2-226ENST00000640414 FAM181AQ8N9Y4 354 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms