RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 GRIA4P48058 902 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 TUBP50607 506 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 ENPP2Q13822 863 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 TEAD4Q15561 434 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 HS2ST1Q7LGA3 356 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 FMNL3Q8IVF7 1028 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 SPACA3Q8IXA5 215 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 PRCCQ92733 491 aaPredicted RBP19.24■□□□□ 0.67
CLN6-212ENST00000636020 TMEM176AQ96HP8 235 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 HPDLQ96IR7 371 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 SEMA4CQ9C0C4 833 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 MTMR12Q9C0I1 747 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 RBAKQ9NYW8 714 aaPredicted RBP19.24■□□□□ 0.67
CLN6-212ENST00000636020 NME7Q9Y5B8 376 aa19.24■□□□□ 0.67
CLN6-212ENST00000636020 RTN3O95197 1032 aaPredicted RBP19.23■□□□□ 0.67
CLN6-212ENST00000636020 WISP1O95388 367 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 KRT18P05783 430 aaKnown RBP19.23■□□□□ 0.67
CLN6-212ENST00000636020 C1SP09871 688 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 CDK4P11802 303 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 CCDC173Q0VFZ6 552 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 INAVAQ3KP66 663 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 TPGS1Q6ZTW0 290 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 ZNF720Q7Z2F6 126 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 SNX19Q92543 992 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 SAAL1Q96ER3 474 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 HNRNPABQ99729 332 aaKnown RBP19.23■□□□□ 0.67
CLN6-212ENST00000636020 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 ELOVL4Q9GZR5 314 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 PDE11AQ9HCR9 933 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 TM9SF3Q9HD45 589 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 BLOC1S4Q9NUP1 217 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 FBXO10Q9UK96 956 aa19.23■□□□□ 0.67
CLN6-212ENST00000636020 MYLKQ15746 1914 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 VWA3AA6NCI4 1184 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 ENC1O14682 589 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
CLN6-212ENST00000636020 RFPL3O75679 317 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 ZDHHC11BP0C7U3 371 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 ACO1P21399 889 aaKnown RBP19.22■□□□□ 0.67
CLN6-212ENST00000636020 IL12RB1P42701 662 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 CTSKP43235 329 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 COPAP53621 1224 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 IL9RQ01113 521 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 RHDQ02161 417 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 SRSF1Q07955 248 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLN6-212ENST00000636020 ORC1Q13415 861 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 MCM6Q14566 821 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 KCNT1Q5JUK3 1230 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 USP49Q70CQ1 688 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 C6orf106Q9H6K1 298 aaPredicted RBP19.22■□□□□ 0.67
CLN6-212ENST00000636020 IL37Q9NZH6 218 aa19.22■□□□□ 0.67
CLN6-212ENST00000636020 THAP10Q9P2Z0 257 aaPredicted RBP19.22■□□□□ 0.67
CLN6-212ENST00000636020 COL5A1P20908 1838 aaPredicted RBP19.22■□□□□ 0.67
CLN6-212ENST00000636020 CLDN5O00501 218 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 NPC1O15118 1278 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 SLC26A4O43511 780 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 BRINP1O60477 761 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 PPP1R37O75864 691 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 TMEM191BP0C7N4 346 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 ACADMP11310 421 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 PTPN1P18031 435 aaKnown RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 GNL1P36915 607 aaPredicted RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 KCNA1Q09470 495 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 KCNH2Q12809 1159 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 HES3Q5TGS1 186 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 FBXL19Q6PCT2 694 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 LAYNQ6UX15 382 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 FAM124AQ86V42 546 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 SCAMP5Q8TAC9 235 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 HVCN1Q96D96 273 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 MRPL45Q9BRJ2 306 aaKnown RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 STRA6Q9BX79 667 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 B3GNT5Q9BYG0 378 aa19.21■□□□□ 0.67
CLN6-212ENST00000636020 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 R3HCC1Q9Y3T6 440 aaKnown RBP19.21■□□□□ 0.67
CLN6-212ENST00000636020 CBX4O00257 560 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 SYNCRIPO60506 623 aaKnown RBP19.2■□□□□ 0.66
CLN6-212ENST00000636020 LDOC1O95751 146 aaPredicted RBP19.2■□□□□ 0.66
CLN6-212ENST00000636020 C6P13671 934 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 ACTN2P35609 894 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 DNAJC3Q13217 504 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 PKDCCQ504Y2 493 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 ERICH1Q86X53 443 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 CCDC83Q8IWF9 413 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 MMS19Q96T76 1030 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 LLPHQ9BRT6 129 aaKnown RBP19.2■□□□□ 0.66
CLN6-212ENST00000636020 KLF16Q9BXK1 252 aaPredicted RBP19.2■□□□□ 0.66
CLN6-212ENST00000636020 NACA2Q9H009 215 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.2■□□□□ 0.667e-7■■■■■ 74.5
CLN6-212ENST00000636020 INTS13Q9NVM9 706 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 SLC27A6Q9Y2P4 619 aa19.2■□□□□ 0.66
CLN6-212ENST00000636020 UNC79Q9P2D8 2635 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 GOLGA8IPA6NC78 632 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 GOLGA8JA6NMD2 632 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 DFNA5O60443 496 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 ACSL1P33121 698 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 NEK4P51957 841 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 TBC1D25Q3MII6 688 aa19.19■□□□□ 0.66
CLN6-212ENST00000636020 OR5B17Q8NGF7 314 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms