RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 WASF3Q9UPY6 502 aa20.01■□□□□ 0.79
SMN2-215ENST00000628696 SCML2Q9UQR0 700 aa20.01■□□□□ 0.79
SMN2-215ENST00000628696 CFAP47Q6ZTR5 3102 aa20.01■□□□□ 0.79
SMN2-215ENST00000628696 FRYQ5TBA9 3013 aa20.01■□□□□ 0.79
SMN2-215ENST00000628696 CACNA1EQ15878 2313 aa20.01■□□□□ 0.79
SMN2-215ENST00000628696 A0A1W2PQH9 124 aa20■□□□□ 0.79
SMN2-215ENST00000628696 PRRT4C9JH25 899 aa20■□□□□ 0.79
SMN2-215ENST00000628696 PDXKO00764 312 aa20■□□□□ 0.79
SMN2-215ENST00000628696 ACTN4O43707 911 aaKnown RBP20■□□□□ 0.79
SMN2-215ENST00000628696 CACNG3O60359 315 aa20■□□□□ 0.79
SMN2-215ENST00000628696 GREM1O60565 184 aa20■□□□□ 0.79
SMN2-215ENST00000628696 RARGP13631 454 aa20■□□□□ 0.79
SMN2-215ENST00000628696 PDIA4P13667 645 aaKnown RBP20■□□□□ 0.79
SMN2-215ENST00000628696 HOXD12P35452 270 aa20■□□□□ 0.79
SMN2-215ENST00000628696 DNM1Q05193 864 aaKnown RBP20■□□□□ 0.79
SMN2-215ENST00000628696 C10orf120Q5SQS8 335 aa20■□□□□ 0.79
SMN2-215ENST00000628696 CLEC20AQ6ZU45 233 aa20■□□□□ 0.79
SMN2-215ENST00000628696 TOGARAM2Q6ZUX3 1019 aa20■□□□□ 0.79
SMN2-215ENST00000628696 CEP76Q8TAP6 659 aa20■□□□□ 0.79
SMN2-215ENST00000628696 TWNKQ96RR1 684 aa20■□□□□ 0.79
SMN2-215ENST00000628696 HNRNPABQ99729 332 aaKnown RBP20■□□□□ 0.79
SMN2-215ENST00000628696 NMUR1Q9HB89 426 aa20■□□□□ 0.79
SMN2-215ENST00000628696 CYLDQ9NQC7 956 aa20■□□□□ 0.79
SMN2-215ENST00000628696 RAD54BQ9Y620 910 aa20■□□□□ 0.79
SMN2-215ENST00000628696 CHD6Q8TD26 2715 aa20■□□□□ 0.79
SMN2-215ENST00000628696 IGHV1OR15-9A0A0B4J2B8 117 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 SPAARA0A1B0GVQ0 90 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 IKBKBO14920 756 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 CALUO43852 315 aaPredicted RBP19.99■□□□□ 0.79
SMN2-215ENST00000628696 KIF20AO95235 890 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 NDUFV2P19404 249 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 PLA2G4AP47712 749 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 ATL3Q6DD88 541 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 SNX21Q969T3 373 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 NT5C1AQ9BXI3 368 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 IMPG2Q9BZV3 1241 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 CACNA2D2Q9NY47 1150 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 PLK2Q9NYY3 685 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 DNMT3LQ9UJW3 386 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 RCOR1Q9UKL0 485 aa19.99■□□□□ 0.79
SMN2-215ENST00000628696 A0A1B0GVL5 298 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 HHLA1C9JL84 531 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 ZNF217O75362 1048 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 SERPINF2P08697 491 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 CD58P19256 250 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 DGKGP49619 791 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 VAMP7P51809 220 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 SIM1P81133 766 aaPredicted RBP19.98■□□□□ 0.79
SMN2-215ENST00000628696 C1orf220Q5T0J3 134 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 PEAR1Q5VY43 1037 aaPredicted RBP19.98■□□□□ 0.79
SMN2-215ENST00000628696 HSCBQ8IWL3 235 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 TRIML1Q8N9V2 468 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 SPRYD3Q8NCJ5 442 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 TMEM174Q8WUU8 243 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 SLC6A17Q9H1V8 727 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 MMRN2Q9H8L6 949 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.98■□□□□ 0.79
SMN2-215ENST00000628696 MARK1Q9P0L2 795 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 NAGPAQ9UK23 515 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 PCDHA5Q9Y5H7 936 aa19.98■□□□□ 0.79
SMN2-215ENST00000628696 ZFHX4Q86UP3 3567 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 HYAL3O43820 417 aaPredicted RBP19.97■□□□□ 0.79
SMN2-215ENST00000628696 OPHN1O60890 802 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 NDUFS2O75306 463 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 CISD3P0C7P0 127 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 TRIM49P0CI25 452 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 TRIM49CP0CI26 452 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 GCLMP48507 274 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 SEMA3BQ13214 749 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 PKP1Q13835 747 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 KIAA1324Q6UXG2 1013 aaKnown RBP19.97■□□□□ 0.79
SMN2-215ENST00000628696 RABEPKQ7Z6M1 372 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 SLC41A1Q8IVJ1 513 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 RGL4Q8IZJ4 473 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 KDF1Q8NAX2 398 aaPredicted RBP19.97■□□□□ 0.79
SMN2-215ENST00000628696 OR2I1PQ8NGU4 316 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 HSPA12BQ96MM6 686 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 GABRG3Q99928 467 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 CYP3A43Q9HB55 503 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 APOBEC3GQ9HC16 384 aaKnown RBP19.97■□□□□ 0.79
SMN2-215ENST00000628696 CAPN10Q9HC96 672 aa19.97■□□□□ 0.79
SMN2-215ENST00000628696 WASH3PC4AMC7 463 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 HMBSP08397 361 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 PFKFB1P16118 471 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 INCA1Q0VD86 236 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 KLHDC10Q6PID8 442 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 PIP4P1Q86T03 277 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 MINDY1Q8N5J2 469 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 DNAI2Q9GZS0 605 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 CD93Q9NPY3 652 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 IGF2RP11717 2491 aa19.96■□□□□ 0.79
SMN2-215ENST00000628696 CACNA1GO43497 2377 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 ARHGAP33O14559 1287 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 STC2O76061 302 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 SYPP08247 313 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 RALAP11233 206 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 KRT13P13646 458 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 NR2F2P24468 414 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 KIF11P52732 1056 aa19.95■□□□□ 0.78
SMN2-215ENST00000628696 PPP3CAQ08209 521 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms