RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GPRC5DQ9NZD1 345 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 PPP2R3BQ9Y5P8 575 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 I3L4J1 428 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 TRDMT1O14717 391 aaKnown RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 DDNO94850 711 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 METTL18O95568 372 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 IL1BP01584 269 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 TFE3P19532 575 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 CPA2P48052 419 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 RBP5P82980 135 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 KRT72Q14CN4 511 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 HSF5Q4G112 596 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 ACSBG2Q5FVE4 666 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 LGSNQ5TDP6 509 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 MPP5Q8N3R9 675 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
VARS2-213ENST00000625423 SPDL1Q96EA4 605 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 FRMD8Q9BZ67 464 aaPredicted RBP11.68□□□□□ -0.54
VARS2-213ENST00000625423 MAGEB5Q9BZ81 275 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 MIS12Q9H081 205 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 FAM49BQ9NUQ9 324 aa11.68□□□□□ -0.54
VARS2-213ENST00000625423 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 KRT36O76013 467 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 KITP10721 976 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 CHI3L2Q15782 390 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 CCDC6Q16204 474 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 FAM187BQ17R55 369 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 MROH9Q5TGP6 573 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 TTC30AQ86WT1 665 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ARID3BQ8IVW6 561 aaPredicted RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.67□□□□□ -0.54
VARS2-213ENST00000625423 TEKT4Q8WW24 435 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 E2F7Q96AV8 911 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 B3GNT5Q9BYG0 378 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 PCMTD2Q9NV79 361 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ITGA11Q9UKX5 1188 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 CSADQ9Y600 493 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 GBE1Q04446 702 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 RCN1Q15293 331 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 WDR60Q8WVS4 1066 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 OTUD5Q96G74 571 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ACAP3Q96P50 834 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.67□□□□□ -0.542e-6■■■■■ 26.8
VARS2-213ENST00000625423 ERAP1Q9NZ08 941 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 RNF181Q9P0P0 153 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 MARCOQ9UEW3 520 aaPredicted RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 KIAA1257Q9ULG3 409 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 DPYSL4O14531 572 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 KRT38O76015 456 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 NEBLO76041 1014 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ATP6V1C1P21283 382 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 CYP2F1P24903 491 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 GRIA1P42261 906 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 MAGEA6P43360 314 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 HDAC4P56524 1084 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 SLC6A3Q01959 620 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 SLC10A2Q12908 348 aaPredicted RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 CBLBQ13191 982 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 KCTD2Q14681 263 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 MDH1BQ5I0G3 518 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ANO7Q6IWH7 933 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ZNF534Q76KX8 674 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 NUDCD3Q8IVD9 361 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 DNAJC9Q8WXX5 260 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 MMP19Q99542 508 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 MRPL45Q9BRJ2 306 aaKnown RBP11.67□□□□□ -0.54
VARS2-213ENST00000625423 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ELP3Q9H9T3 547 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
VARS2-213ENST00000625423 HMX2A2RU54 273 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 LIN7AO14910 233 aaPredicted RBP11.66□□□□□ -0.54
VARS2-213ENST00000625423 PAPSS1O43252 624 aaPredicted RBP11.66□□□□□ -0.54
VARS2-213ENST00000625423 GABBR2O75899 941 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 TOP3BO95985 862 aaKnown RBP11.66□□□□□ -0.54
VARS2-213ENST00000625423 PDHA1P08559 390 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 RARBP10826 455 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 CCNFP41002 786 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 CAPRIN2Q6IMN6 1127 aaKnown RBP11.66□□□□□ -0.54
VARS2-213ENST00000625423 NDUFAF2Q8N183 169 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 MCUQ8NE86 351 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 SIGLEC10Q96LC7 697 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 C7orf26Q96N11 449 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 TBCBQ99426 244 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 LPIN3Q9BQK8 851 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 ZNF670Q9BS34 389 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 C20orf27Q9GZN8 174 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 CXCL16Q9H2A7 254 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 KCNK4Q9NYG8 393 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 SIRPGQ9P1W8 387 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 NR2E3Q9Y5X4 410 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 KAT6AQ92794 2004 aa11.66□□□□□ -0.54
VARS2-213ENST00000625423 F5H423 210 aaPredicted RBP11.66□□□□□ -0.54
VARS2-213ENST00000625423 SLC25A27O95847 323 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms