RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PDIA2Q13087 525 aaKnown RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 EFTUD2Q15029 972 aaKnown RBP eCLIP10.96□□□□□ -0.66
VPS11-208ENST00000621676 FOXR1Q6PIV2 292 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 DENND5BQ6ZUT9 1274 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 UNC5BQ8IZJ1 945 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 LRRC52Q8N7C0 313 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 PCDH19Q8TAB3 1148 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 URGCPQ8TCY9 931 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 BCL7CQ8WUZ0 217 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 FAM136AQ96C01 138 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 PGBD4Q96DM1 585 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 ZNF512Q96ME7 567 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 RTP3Q9BQQ7 232 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 CNPY3Q9BT09 278 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 DUSP16Q9BY84 665 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 NMUR1Q9HB89 426 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 SLC38A7Q9NVC3 462 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 VANGL2Q9ULK5 521 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 Q9Y3F1 56 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 PPME1Q9Y570 386 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 I6L893 689 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 SLC5A3P53794 718 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 MAGOHP61326 146 aaKnown RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 MGAT3Q09327 533 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 SIX1Q15475 284 aaPredicted RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 LRRC26Q2I0M4 334 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 BTBD8Q5XKL5 378 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 RFWD3Q6PCD5 774 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 GDAP1Q8TB36 358 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 AENQ8WTP8 325 aaKnown RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 SMG9Q9H0W8 520 aaKnown RBP10.96□□□□□ -0.66
VPS11-208ENST00000621676 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 CYP4F11Q9HBI6 524 aa10.96□□□□□ -0.66
VPS11-208ENST00000621676 ATG2BQ96BY7 2078 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 hCG_1818297A0A087WSY0 165 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 PER2O15055 1255 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 BUD23O43709 281 aaKnown RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 KPNA6O60684 536 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 ZBED1O96006 694 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 CTCFP49711 727 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 SLC25A11Q02978 314 aaKnown RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 SLC10A2Q12908 348 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 MAP3K21Q5TCX8 1036 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 RNF19BQ6ZMZ0 732 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 FAM126BQ8IXS8 530 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 THEM5Q8N1Q8 247 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 FAF2Q96CS3 445 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.666e-7■■■■■ 36.2
VPS11-208ENST00000621676 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 WDCPQ9H6R7 721 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 AVENQ9NQS1 362 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 ACSS2Q9NR19 701 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 RNF14Q9UBS8 474 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 CCDC188H7C350 402 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 MCF2LO15068 1137 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 NEBLO76041 1014 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 KCNE1P15382 129 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 ECHS1P30084 290 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 CHRNA3P32297 505 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 YWHAGP61981 247 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS11-208ENST00000621676 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
VPS11-208ENST00000621676 C10orf120Q5SQS8 335 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 WDR93Q6P2C0 686 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 ATL2Q8NHH9 583 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 FAM81BQ96LP2 452 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 PCDHGC3Q9UN70 934 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 GIT1Q9Y2X7 761 aa10.95□□□□□ -0.66
VPS11-208ENST00000621676 GOLGA6L7A0A1B0GV03 622 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 LSM8O95777 96 aaKnown RBP10.94□□□□□ -0.66
VPS11-208ENST00000621676 WEE1P30291 646 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 PTGIRP43119 386 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 PMS2P54278 862 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 MAXP61244 160 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 INCA1Q0VD86 236 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 PCSK7Q16549 785 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 TTMPQ5BVD1 217 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 KCNT2Q6UVM3 1135 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 ARHGAP36Q6ZRI8 547 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 CD302Q8IX05 232 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 RASGEF1CQ8N431 466 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 RNF139Q8WU17 664 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 MYLIPQ8WY64 445 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 SEPT8Q92599 483 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 CDH22Q9UJ99 828 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 CNTN6Q9UQ52 1028 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 BTNL10A8MVZ5 291 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 ATP9BO43861 1147 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 ZKSCAN8Q15776 578 aaPredicted RBP10.94□□□□□ -0.66
VPS11-208ENST00000621676 PSMD5Q16401 504 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 PID1Q7Z2X4 250 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 RCOR2Q8IZ40 523 aa10.94□□□□□ -0.66
VPS11-208ENST00000621676 C4orf33Q8N1A6 199 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms