RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 FAM49BQ9NUQ9 324 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 DLL3Q9NYJ7 618 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 HMGXB4Q9UGU5 601 aa16.98■□□□□ 0.31
CD40-207ENST00000620709 OAS1P00973 400 aaKnown RBP16.97■□□□□ 0.31
CD40-207ENST00000620709 TCF3P15923 654 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 SLC9A1P19634 815 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 ADORA2BP29275 332 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 HOXA6P31267 233 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 GTF2H1P32780 548 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 GCLMP48507 274 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 MXI1P50539 228 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 SLC5A3P53794 718 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 ATXN1P54253 815 aaKnown RBP16.97■□□□□ 0.31
CD40-207ENST00000620709 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 CCDC6Q16204 474 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 C1orf220Q5T0J3 134 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 PAQR9Q6ZVX9 377 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 TTC30AQ86WT1 665 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 SLC2A14Q8TDB8 520 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 GAB3Q8WWW8 586 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 EZH1Q92800 747 aaPredicted RBP16.97■□□□□ 0.31
CD40-207ENST00000620709 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 NUCKS1Q9H1E3 243 aaKnown RBP16.97■□□□□ 0.31
CD40-207ENST00000620709 GANQ9H2C0 597 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 SEMA4GQ9NTN9 838 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 ZNHIT6Q9NWK9 470 aaKnown RBP16.97■□□□□ 0.31
CD40-207ENST00000620709 GMIPQ9P107 970 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 DAAM1Q9Y4D1 1078 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 SDK1Q7Z5N4 2213 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 CACNA1AO00555 2505 aa16.97■□□□□ 0.31
CD40-207ENST00000620709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.96■□□□□ 0.31
CD40-207ENST00000620709 SLC9A3R1O14745 358 aaPredicted RBP16.96■□□□□ 0.31
CD40-207ENST00000620709 IRF1P10914 325 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 PPP3CAQ08209 521 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 DMC1Q14565 340 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 C2orf27AQ580R0 203 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 HECTD3Q5T447 861 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 KLHDC7AQ5VTJ3 777 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 TRIM65Q6PJ69 517 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 KBTBD6Q86V97 674 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 TMTC1Q8IUR5 882 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 FUKQ8N0W3 1084 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 BAP1Q92560 729 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 TAF4BQ92750 862 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 ACDQ96AP0 544 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 ARRDC1-AS1Q9H2J1 176 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 TMEM8AQ9HCN3 771 aa16.96■□□□□ 0.31
CD40-207ENST00000620709 DCDC2BA2VCK2 349 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 COCHO43405 550 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 CYP17A1P05093 508 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 CD58P19256 250 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 OPRD1P41143 372 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 SLC6A11P48066 632 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 POLR2FP61218 127 aaKnown RBP16.96■□□□□ 0.3
CD40-207ENST00000620709 DHCR24Q15392 516 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 MEA1Q16626 185 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 KRT39Q6A163 491 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 DDX42Q86XP3 938 aaKnown RBP eCLIP16.96■□□□□ 0.3
CD40-207ENST00000620709 CCDC33Q8N5R6 958 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 CAMKK1Q8N5S9 505 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 OVCA2Q8WZ82 227 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.3
CD40-207ENST00000620709 CCSER2Q9H7U1 834 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 SH3BP1Q9Y3L3 701 aa16.96■□□□□ 0.3
CD40-207ENST00000620709 MYO16Q9Y6X6 1858 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 BEST1O76090 585 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 APBB3O95704 486 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 OLFM2O95897 454 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 ASS1P00966 412 aaKnown RBP16.95■□□□□ 0.3
CD40-207ENST00000620709 UCHL3P15374 230 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 HNRNPH3P31942 346 aaKnown RBP16.95■□□□□ 0.3
CD40-207ENST00000620709 ASPAP45381 313 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 DGKEP52429 567 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 CSRP2Q16527 193 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 DPY19L2P1Q6NXN4 242 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 PRR23CQ6ZRP0 262 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 RRAGAQ7L523 313 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 SYT13Q7L8C5 426 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 ADGRG2Q8IZP9 1017 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 SMOQ99835 787 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 SIX2Q9NPC8 291 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 NLRC4Q9NPP4 1024 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 INVSQ9Y283 1065 aa16.95■□□□□ 0.3
CD40-207ENST00000620709 ANTXRLA6NF34 631 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 SOWAHDA6NJG2 315 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 TNFRSF10BO14763 440 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 CCP110O43303 1012 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 LRP3O75074 770 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 ADH1CP00326 375 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 FAM200BP0CF97 657 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 KCNA4P22459 653 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 CDK17Q00537 523 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 KDSRQ06136 332 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 UNC93AQ86WB7 457 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 EHBP1Q8NDI1 1231 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 TSTD1Q8NFU3 115 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 CCDC26Q8TAB7 109 aa16.94■□□□□ 0.3
CD40-207ENST00000620709 TAS1R2Q8TE23 839 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms