RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PGK2P07205 417 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 RALBP11234 206 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SOAT1P35610 550 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SLC34A1Q06495 639 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SLC9A5Q14940 896 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 R3HDM1Q15032 1099 aaKnown RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 C11orf96Q7Z7L8 435 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 TDRD5Q8NAT2 981 aaKnown RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 STK32AQ8WU08 396 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 GTF3C2Q8WUA4 911 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ALG3Q92685 438 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 PCDHB18PQ96TA0 734 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 C17orf80Q9BSJ5 609 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SPATA16Q9BXB7 569 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CYP39A1Q9NYL5 469 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SAE1Q9UBE0 346 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 COG5Q9UP83 839 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 PKP3Q9Y446 797 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 TRPC5OSA6NMA1 111 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SNHG28P0DPA3 235 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 DSG3P32926 999 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SOX11P35716 441 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ALDH1A3P47895 512 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 HDAC4P56524 1084 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 DPYSL3Q14195 570 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 OLFML2BQ68BL8 750 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 STRA8Q7Z7C7 330 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CCNJLQ8IV13 435 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF555Q8NEP9 628 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 APBB2Q92870 758 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 HSD17B14Q9BPX1 270 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SLC38A7Q9NVC3 462 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 IL1RAPL1Q9NZN1 696 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 DDHD2O94830 711 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CELF2O95319 508 aaKnown RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 APOA4P06727 396 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 PAX7P23759 505 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 MMP13P45452 471 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 BTKQ06187 659 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF268Q14587 947 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF484Q5JVG2 852 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 N4BP2L1Q5TBK1 243 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CATSPERBQ9H7T0 1116 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 HPS4Q9NQG7 708 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 E7ENQ6 273 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 E9PBE3 544 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 KLHL41O60662 606 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 NDUFS3O75489 264 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 FAM200BP0CF97 657 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 FCGRTP55899 365 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 DGKDQ16760 1214 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ATP13A4Q4VNC1 1196 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 TDRD10Q5VZ19 366 aaKnown RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 NPNTQ6UXI9 565 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 LINC00523Q86TU6 105 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 LRRC57Q8N9N7 239 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 TMEM161BQ8NDZ6 487 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 INPP5DQ92835 1189 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 FAM162AQ96A26 154 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZBTB10Q96DT7 871 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ZNF512Q96ME7 567 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ANKRD27Q96NW4 1050 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CYP3A43Q9HB55 503 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 FAM53CQ9NYF3 392 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ARMCX1Q9P291 453 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 SYNPO2Q9UMS6 1093 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 C17orf102A2RUQ5 167 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 XPO1O14980 1071 aaKnown RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 THRAP10827 490 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 CDC25CP30307 473 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 PNPLA4P41247 253 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 RAP1GDS1P52306 607 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 PLOD1Q02809 727 aaPredicted RBP8.6□□□□□ -1.03
ALMS1-208ENST00000620466 ENTPD7Q9NQZ7 604 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 TSPAN16Q9UKR8 245 aa8.6□□□□□ -1.03
ALMS1-208ENST00000620466 KDELR1P24390 212 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 GLRBP48167 497 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 DMC1Q14565 340 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 UGCGQ16739 394 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ZCWPW2Q504Y3 356 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 NBPF12Q5TAG4 269 aaPredicted RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 BRSK2Q8IWQ3 736 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ZFP42Q96MM3 310 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CCT7Q99832 543 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 SAR1AQ9NR31 198 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 UBQLN1Q9UMX0 589 aaKnown RBP8.59□□□□□ -1.03
ALMS1-208ENST00000620466 UBIAD1Q9Y5Z9 338 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 ADGRA3Q8IWK6 1321 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 DCDC2CA8MYV0 355 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 MYO1GB0I1T2 1018 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 C2CD2LO14523 706 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 NDST1P52848 882 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CDH8P55286 799 aa8.59□□□□□ -1.03
ALMS1-208ENST00000620466 CYLC2Q14093 348 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms