RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GOLGA8DPQ0D2H9 430 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TRIM29Q14134 588 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 SF3A1Q15459 793 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 DDR2Q16832 855 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 KIF19Q2TAC6 998 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TTC38Q5R3I4 469 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 KRT79Q5XKE5 535 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 KIAA0895LQ68EN5 471 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 GPIHBP1Q8IV16 184 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 SFTPA1Q8IWL2 248 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 PGBD3Q8N328 593 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ZNF557Q8N988 423 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 NSUN7Q8NE18 718 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 SNX29Q8TEQ0 813 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 UCMAQ8WVF2 138 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 MYLPFQ96A32 169 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 IFT43Q96FT9 208 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CNDP2Q96KP4 475 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 AK8Q96MA6 479 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 SYT15Q9BQS2 421 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 RNF38Q9H0F5 515 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 LHX5Q9H2C1 402 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ADNPQ9H2P0 1102 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 KDM4CQ9H3R0 1056 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 VRTNQ9H8Y1 702 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CYLDQ9NQC7 956 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 FAM13BQ9NYF5 915 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 FZD4Q9ULV1 537 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 NOL7Q9UMY1 257 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 SNX11Q9Y5W9 270 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 MORC2Q9Y6X9 1032 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 A0A1W2PR77 199 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TBC1D3BA6NDS4 549 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CKMT2P17540 419 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 LIG1P18858 919 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 NMT1P30419 496 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 CXADRP78310 365 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 MESP2Q0VG99 397 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 OVGP1Q12889 678 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 FUT11Q495W5 492 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 HECTD3Q5T447 861 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 HES3Q5TGS1 186 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ARL6IP4Q66PJ3 421 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 DYMQ7RTS9 669 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 NUP93Q8N1F7 819 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TMEM174Q8WUU8 243 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 PRCCQ92733 491 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 TBATAQ96M53 351 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 DEPDC7Q96QD5 511 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CYP2S1Q96SQ9 504 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CSNK1G1Q9HCP0 422 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ASCL3Q9NQ33 180 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 PDRG1Q9NUG6 133 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TBC1D7Q9P0N9 293 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TUBD1Q9UJT1 453 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 STOML2Q9UJZ1 356 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 SH3BP1Q9Y3L3 701 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 PCDHA5Q9Y5H7 936 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ITIH6Q6UXX5 1313 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 UBR5O95071 2799 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 TPRP12270 2363 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 CACNA1EQ15878 2313 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 COCHO43405 550 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 MAGEC1O60732 1142 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 DGKGP49619 791 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 GUCY2FP51841 1108 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 BCAT1P54687 386 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 INSM1Q01101 510 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 KCNH2Q12809 1159 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 KRTAP21-3Q3LHN1 58 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TADA2BQ86TJ2 420 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 MIB1Q86YT6 1006 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ABCA7Q8IZY2 2146 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 PNMA5Q96PV4 448 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 ELF4Q99607 663 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 DCLK3Q9C098 648 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 TMEM245Q9H330 911 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 CRTAC1Q9NQ79 661 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 NCKIPSDQ9NZQ3 722 aa4.86□□□□□ -1.63
SNCA-213ENST00000618500 AGO2Q9UKV8 859 aaKnown RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 MAGED2Q9UNF1 606 aaPredicted RBP4.86□□□□□ -1.63
SNCA-213ENST00000618500 ZNF106Q9H2Y7 1883 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 F5P12259 2224 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 A0A1B0GVT2 93 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 CDRT15L2A8MXV6 281 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 BTBD18B2RXH4 712 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 H0Y8X5 98 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SLC7A4O43246 635 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SUV39H1O43463 412 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 MBL2P11226 248 aaPredicted RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 GLDCP23378 1020 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 DUSP3P51452 185 aaPredicted RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 RIPPLY3P57055 190 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 NXPH1P58417 271 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 USP46P62068 366 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 SNRPFP62306 86 aaKnown RBP4.85□□□□□ -1.63
SNCA-213ENST00000618500 ST3GAL1Q11201 340 aa4.85□□□□□ -1.63
SNCA-213ENST00000618500 MYO1EQ12965 1108 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms