RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TNFRSF8P28908 595 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 FLT3P36888 993 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 DAOAP59103 153 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ATP11AP98196 1134 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 GPS2Q13227 327 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 CYP1B1Q16678 543 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 CDO1Q16878 200 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCDC14Q49A88 953 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 BEND5Q7L4P6 421 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ADAT2Q7Z6V5 191 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 SCN4BQ8IWT1 228 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 C12orf50Q8NA57 414 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 OR10T2Q8NGX3 314 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 C8orf48Q96LL4 319 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 CFAP57Q96MR6 1250 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 SLITRK1Q96PX8 696 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 DDX47Q9H0S4 455 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ALG13Q9NP73 1137 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ABI2Q9NYB9 513 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 PCSK1NQ9UHG2 260 aa17.49■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZNF487B1APH4 448 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 MDM4O15151 490 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZNF189O75820 626 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 RTN3O95197 1032 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 ECEL1O95672 775 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 LTFP02788 710 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZFXP17010 805 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 KDELR1P24390 212 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 GATMP50440 423 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZNF135P52742 658 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 SLC25A11Q02978 314 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 KRT17Q04695 432 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 DLX2Q07687 328 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 MRPL58Q14197 206 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCNG2Q16589 344 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 DCAF6Q58WW2 860 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCDC137Q6PK04 289 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 DEFB106AQ8N104 65 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 HSPH1Q92598 858 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 PKMYT1Q99640 499 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 FAM129AQ9BZQ8 928 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 LRRC19Q9H756 370 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 PRKAG3Q9UGI9 489 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 PCYOX1Q9UHG3 505 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 HCN4Q9Y3Q4 1203 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 PCDHB12Q9Y5F1 795 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 KIAA1671Q9BY89 1806 aa17.48■□□□□ 0.39
TRAPPC3-210ENST00000617904 C19orf67A6NJJ6 358 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 DNAJB1P25685 340 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 COILP38432 576 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ARL4AP40617 200 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 GUCY2DQ02846 1103 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ZP2Q05996 745 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 DEUP1Q05D60 604 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 PPP1R7Q15435 360 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ERMARDQ5T6L9 678 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 KCNT2Q6UVM3 1135 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 RFX6Q8HWS3 928 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CMASQ8NFW8 434 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ATL2Q8NHH9 583 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 SLC2A13Q96QE2 648 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 FERMT1Q9BQL6 677 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CALN1Q9BXU9 219 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 EPB41L5Q9HCM4 733 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ABCC13Q9NSE7 274 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 MARCH5Q9NX47 278 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 SPG21Q9NZD8 308 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 FAM50BQ9Y247 325 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 BACE2Q9Y5Z0 518 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 TSC2P49815 1807 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 RAD51CO43502 376 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CSPG5O95196 566 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 RARAP10276 462 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 IGFBP6P24592 240 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 TUFMP49411 452 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 PSEN1P49768 467 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CDH6P55285 790 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 ARPP19P56211 112 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 GPR17Q13304 367 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 C15orf59Q2T9L4 293 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 BTBD8Q5XKL5 378 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 KAZNQ674X7 775 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 PM20D1Q6GTS8 502 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 BZW1Q7L1Q6 419 aaKnown RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 SPPL3Q8TCT6 385 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 RNF139Q8WU17 664 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CENPIQ92674 756 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 IGSF21Q96ID5 467 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 CCDC114Q96M63 670 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 KCNK16Q96T55 309 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 AMACRQ9UHK6 382 aa17.47■□□□□ 0.39
TRAPPC3-210ENST00000617904 hCG_1818297A0A087WSY0 165 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 PRR33A8MZF0 331 aa17.46■□□□□ 0.38
TRAPPC3-210ENST00000617904 M0QYT0 321 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms