RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 TRAPPC9Q96Q05 1148 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 WDR24Q96S15 920 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 SENP7Q9BQF6 1050 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 NUDT22Q9BRQ3 303 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 TAF1DQ9H5J8 278 aaPredicted RBP4.94□□□□□ -1.62
NEAT1-205ENST00000616315 AKIP1Q9NQ31 210 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 TMEM74BQ9NUR3 256 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 INTS13Q9NVM9 706 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 DKK2Q9UBU2 259 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 USP22Q9UPT9 525 aa4.94□□□□□ -1.62
NEAT1-205ENST00000616315 PNMA6EA0A0J9YXQ4 647 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 H0Y3Z8 333 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 J3KRW8 73 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 AGPSO00116 658 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 EYA2O00167 538 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 TK1P04183 234 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 CNTFP26441 200 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 PLA2G5P39877 138 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 DDX10Q13206 875 aaKnown RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 CUL4BQ13620 913 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 CSHL1Q14406 222 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 GRM4Q14833 912 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 FAM110CQ1W6H9 321 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 BTBD16Q32M84 506 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 TRIM60Q495X7 471 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 HERC6Q8IVU3 1022 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ABRAQ8N0Z2 381 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 FSTL5Q8N475 847 aaPredicted RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 SIMC1Q8NDZ2 872 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 PPHLN1Q8NEY8 458 aaKnown RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 OR6Y1Q8NGX8 325 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 AFG1LQ8WV93 481 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ASB12Q8WXK4 309 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 SDCCAG3Q96C92 435 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 C17orf80Q9BSJ5 609 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 VN1R3Q9BXE9 311 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ACTRT3Q9BYD9 372 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 TPSD1Q9BZJ3 242 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ZHX3Q9H4I2 956 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ELAC1Q9H777 363 aaKnown RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 ALG13Q9NP73 1137 aaKnown RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 RIC8AQ9NPQ8 531 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 WASH6PQ9NQA3 447 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 FSCN3Q9NQT6 498 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 VPS45Q9NRW7 570 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 RIMKLBQ9ULI2 386 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 NFU1Q9UMS0 254 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 DAPP1Q9UN19 280 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 C19orf53Q9UNZ5 99 aaPredicted RBP4.93□□□□□ -1.62
NEAT1-205ENST00000616315 MAP3K2Q9Y2U5 619 aa4.93□□□□□ -1.62
NEAT1-205ENST00000616315 COL15A1P39059 1388 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 PPP6R2O75170 966 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 CDKL5O76039 1030 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 POLBP06746 335 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 PPP3CBP16298 524 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 GATA3P23771 443 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 HTR7P34969 479 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 AARSP49588 968 aaKnown RBP eCLIP4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SEC24CP53992 1094 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 GEMIN4P57678 1058 aaKnown RBP4.92□□□□□ -1.62
NEAT1-205ENST00000616315 ACTR2P61160 394 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 RESTQ13127 1097 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 BEAN1Q3B7T3 259 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 EPHA10Q5JZY3 1008 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 TTC22Q5TAA0 569 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 CLEC9AQ6UXN8 241 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 RRAGAQ7L523 313 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 TMTC1Q8IUR5 882 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 IZUMO1Q8IYV9 350 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 LCORLQ8N3X6 602 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SLC30A5Q8TAD4 765 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SUN3Q8TAQ9 357 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 HERVK_113Q902F9 699 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SKA1Q96BD8 255 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 C3orf49Q96BT1 292 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SEC62Q99442 399 aaKnown RBP4.92□□□□□ -1.62
NEAT1-205ENST00000616315 AMBRA1Q9C0C7 1298 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 GGA3Q9NZ52 723 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 TESQ9UGI8 421 aaKnown RBP4.92□□□□□ -1.62
NEAT1-205ENST00000616315 SLC27A6Q9Y2P4 619 aa4.92□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A18PA6NE21 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A16PA6NEW6 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A9PA6NNJ1 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 EFCAB8A8MWE9 144 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A5PA8MXJ8 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 PPM1DO15297 605 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 TAF5LO75529 589 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 RPP40O75818 363 aaKnown RBP4.91□□□□□ -1.62
NEAT1-205ENST00000616315 NDUFA10O95299 355 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 PRKCBP05771 671 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A15PP0C7V4 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 FAM90A14PP0C7W9 464 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 JUPP14923 745 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 XBP1P17861 261 aa4.91□□□□□ -1.62
NEAT1-205ENST00000616315 YY1P25490 414 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms