RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TTC25Q96NG3 672 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TGS1Q96RS0 853 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 JMJD8Q96S16 334 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 STRBPQ96SI9 672 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PSMB7Q99436 277 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCT7Q99832 543 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC77Q9BR77 488 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TCHPQ9BT92 498 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAK16Q9BXY0 300 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CRNKL1Q9BZJ0 848 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM9Q9C026 710 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC27Q9C0I9 530 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 NACA2Q9H009 215 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 TCP11L1Q9NUJ3 509 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 NKIRAS1Q9NYS0 192 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 SENP1Q9P0U3 644 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PHTF1Q9UMS5 762 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DMTF1Q9Y222 760 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 MTO1Q9Y2Z2 717 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM32AQ9Y421 112 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 PCDHB2Q9Y5E7 798 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 CD2APQ9Y5K6 639 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 AFDNP55196 1824 aaKnown RBP4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 NRXN3Q9Y4C0 1643 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADAMTS13Q76LX8 1427 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 DLEC1Q9Y238 1755 aa4.27□□□□□ -1.73
HMGB1P50-201ENST00000605814 RREB1Q92766 1687 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM86C2PA6NEL3 165 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM47DPA6NHR8 397 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 MIF4GDA9UHW6 222 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 B4E1Z4 1266 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FFAR3O14843 346 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 LSM1O15116 133 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 EPHB6O15197 1021 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC26A4O43511 780 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KCNQ3O43525 872 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KDM1AO60341 852 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDE8AO60658 829 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDH16O75309 829 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SUPT3HO75486 399 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRMUO75648 421 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FAM155BO75949 473 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 STK10O94804 968 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 BAIAP3O94812 1187 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CYBBP04839 570 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 C8BP07358 591 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CD48P09326 243 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDGFRBP09619 1106 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FGRP09769 529 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RARBP10826 455 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ITGA4P13612 1032 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 BRAFP15056 766 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 VCLP18206 1134 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 GNAT2P19087 354 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 POLD1P28340 1107 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SERPINB3P29508 390 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 STIP1P31948 543 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PPARGP37231 505 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 IFNAR2P48551 515 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CHN2P52757 468 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARFIP2P53365 341 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PLTPP55058 493 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 GJA9P57773 515 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ACTR3P61158 418 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 HAND2P61296 217 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 AP2B1P63010 937 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TUBA4AP68366 448 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 FKBP3Q00688 224 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PFKPQ01813 784 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CDR2Q01850 454 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PPIDQ08752 370 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLHL30Q0D2K2 578 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TCIRG1Q13488 830 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPARCL1Q14515 664 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 RRP1BQ14684 758 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CBX2Q14781 532 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KIF22Q14807 665 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 WTAPQ15007 396 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 DLGAP5Q15398 846 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC142Q17RM4 750 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 PROSER3Q2NL68 480 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM71Q2Q1W2 868 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 P3H1Q32P28 736 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 SEZ6Q53EL9 994 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 EARS2Q5JPH6 523 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMEM53Q6P2H8 277 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ALKBH5Q6P6C2 394 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KLHL35Q6PF15 583 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 UGT2A3Q6UWM9 527 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 OLFML1Q6UWY5 402 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 LRRC55Q6ZSA7 311 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKS1BQ7Z6G8 1248 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 CLNKQ7Z7G1 428 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 NOP9Q86U38 636 aaKnown RBP4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 MICU3Q86XE3 530 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 TBC1D10CQ8IV04 446 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 KBTBD2Q8IY47 623 aa4.26□□□□□ -1.73
HMGB1P50-201ENST00000605814 AHI1Q8N157 1196 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms