RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 DDI2Q5TDH0 399 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF544Q6NX49 715 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 GJB7Q6PEY0 223 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 EID3Q8N140 333 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 RORBQ92753 470 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 NOL6Q9H6R4 1146 aaKnown RBP9.88□□□□□ -0.83
CSMD1-217ENST00000602723 THAP1Q9NVV9 213 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 VANGL2Q9ULK5 521 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 DUSP12Q9UNI6 340 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 MYRFQ9Y2G1 1151 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
CSMD1-217ENST00000602723 F8VZ95 297 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 HMGB3O15347 200 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 FYNP06241 537 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ITGA4P13612 1032 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 MYL12AP19105 171 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 GEMP55040 296 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 C21orf59P57076 290 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 MROH7Q68CQ1 1323 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 INPP4BO15327 924 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ALOX12P18054 663 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 FASP25445 335 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ALDH1A3P47895 512 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 WASHC2DQ5SRD0 308 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 TYW3Q6IPR3 259 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 DCP1BQ8IZD4 617 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 OSCP1Q8WVF1 389 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ELOVL6Q9H5J4 265 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 COPS7BQ9H9Q2 264 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 C15orf41Q9Y2V0 281 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 DUSP10Q9Y6W6 482 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ATG7O95352 703 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 NPTXRO95502 500 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 NDUFB10O96000 172 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 OOSP2Q86WS3 158 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PLAGL2Q9UPG8 496 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PNMA8CA0A1B0GUJ8 204 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 EIF2B5Q13144 721 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 RUSC1Q9BVN2 902 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SLC24A2Q9UI40 661 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ITGA1P56199 1179 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 MYO1HQ8N1T3 1032 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 BHMTQ93088 406 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 NSUN4Q96CB9 384 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 WDCPQ9H6R7 721 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 IARS2Q9NSE4 1012 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 DRG1Q9Y295 367 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PAX7P23759 505 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SLC1A6P48664 564 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 YWHAZP63104 245 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PPP1R14AQ96A00 147 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SEPHS2Q99611 448 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PLA2G6O60733 806 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PPIDQ08752 370 aaKnown RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 CCDC153Q494R4 210 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 KIAA0408Q6ZU52 694 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 GPRASP2Q96D09 838 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 OXNAD1Q96HP4 312 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 POLG2Q9UHN1 485 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 RAD54BQ9Y620 910 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 GRK4P32298 578 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PNPLA4P41247 253 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 GSSP48637 474 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 HK2P52789 917 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 NR6A1Q15406 480 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF772Q68DY9 489 aaPredicted RBP9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SVOPQ8N4V2 548 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 MED8Q96G25 268 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 UBDO15205 165 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 PDE9AO76083 593 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 FOXO4P98177 505 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SCARF1Q14162 830 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 CASP12Q6UXS9 341 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 SLC26A11Q86WA9 606 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 CCDC33Q8N5R6 958 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 KCTD17Q8N5Z5 321 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 ZNF614Q8N883 585 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 KATNAL1Q9BW62 490 aa9.87□□□□□ -0.83
CSMD1-217ENST00000602723 NFICP08651 508 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 HPGDP15428 266 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 GRK3P35626 688 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 PURAQ00577 322 aaKnown RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 STX4Q12846 297 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ZSWIM7Q19AV6 140 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 OTUD3Q5T2D3 398 aaPredicted RBP9.86□□□□□ -0.83
CSMD1-217ENST00000602723 LRRC49Q8IUZ0 686 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 SETD9Q8NE22 299 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 TMEM121Q9BTD3 319 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 MTMR12Q9C0I1 747 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 LRRC40Q9H9A6 602 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 GPRC5DQ9NZD1 345 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 CYP27B1O15528 508 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ERVK-24P63145 666 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 AMHR2Q16671 573 aa9.86□□□□□ -0.83
CSMD1-217ENST00000602723 ANKS6Q68DC2 871 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms