RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TBC1D3BA6NDS4 549 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 NEDD8-MDP1E9PL57 170 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 M0QYV0 167 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 STC2O76061 302 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 APBB3O95704 486 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 KRT5P13647 590 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 TNFRSF4P43489 277 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 ZNF132P52740 706 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 SRSF5Q13243 272 aaKnown RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 PKDCCQ504Y2 493 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 TPGS1Q6ZTW0 290 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 ENOSF1Q7L5Y1 443 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 ETFBKMTQ8IXQ9 262 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 GPR161Q8N6U8 529 aaKnown RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 FAM81BQ96LP2 452 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 KREMEN1Q96MU8 473 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 XPO6Q96QU8 1125 aaKnown RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 BBS2Q9BXC9 721 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 DCLK3Q9C098 648 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 CNGB3Q9NQW8 809 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 OLA1Q9NTK5 396 aaKnown RBP16.01■□□□□ 0.15
TRIM28-203ENST00000593582 GPR179Q6PRD1 2367 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 OTOGLQ3ZCN5 2332 aa16.01■□□□□ 0.15
TRIM28-203ENST00000593582 TULP3O75386 442 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 RPP40O75818 363 aaKnown RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 LCP1P13796 627 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 TYRP14679 529 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 MTIF2P46199 727 aaKnown RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 MESP2Q0VG99 397 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 DPCR1Q3MIW9 517 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 HSF5Q4G112 596 aaPredicted RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 GBP6Q6ZN66 633 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 Q6ZNB5 142 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 FAM114A1Q8IWE2 563 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 SFTPA1Q8IWL2 248 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 PHTF2Q8N3S3 785 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 TSTD1Q8NFU3 115 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 RNF139Q8WU17 664 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 SLC35F5Q8WV83 523 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 GAB3Q8WWW8 586 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 NDRG1Q92597 394 aaKnown RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 GBP4Q96PP9 640 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 CRACR2AQ9BSW2 395 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 THAP9Q9H5L6 903 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 LMBRD1Q9NUN5 540 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 DNAJC17Q9NVM6 304 aaKnown RBP16■□□□□ 0.15
TRIM28-203ENST00000593582 MARK1Q9P0L2 795 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 MMP17Q9ULZ9 603 aa16■□□□□ 0.15
TRIM28-203ENST00000593582 SLC12A8A0AV02 714 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 YJEFN3A6XGL0 299 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 E7ENQ6 273 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 AXIN1O15169 862 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 CACNG3O60359 315 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 RETP07949 1114 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 HMBSP08397 361 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 ERCC5P28715 1186 aaPredicted RBP15.99■□□□□ 0.15
TRIM28-203ENST00000593582 CORO1AP31146 461 aaKnown RBP15.99■□□□□ 0.15
TRIM28-203ENST00000593582 TIE1P35590 1138 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 CHKAP35790 457 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 RGS7P49802 495 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 DGKEP52429 567 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 MFAP3P55082 362 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 EXOC3L4Q17RC7 722 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 GRAMD4Q6IC98 578 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 PMF1Q6P1K2 205 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 TRIM65Q6PJ69 517 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 BHLHA9Q7RTU4 235 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 SCML4Q8N228 414 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 ALLCQ8N6M5 410 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 TERB1Q8NA31 727 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 KCNV2Q8TDN2 545 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 HSFY1Q96LI6 401 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 APEX2Q9UBZ4 518 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 EBF1Q9UH73 591 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 CNTN6Q9UQ52 1028 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 DCHS1Q96JQ0 3298 aa15.99■□□□□ 0.15
TRIM28-203ENST00000593582 GTPBP10A4D1E9 387 aaKnown RBP15.98■□□□□ 0.15
TRIM28-203ENST00000593582 MED7O43513 233 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 KLF8O95600 359 aaPredicted RBP15.98■□□□□ 0.15
TRIM28-203ENST00000593582 CALCAP01258 141 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 KLKB1P03952 638 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 SLC9A1P19634 815 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 DAOAP59103 153 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 CRY1Q16526 586 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 C10orf76Q5T2E6 689 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 EMC10Q5UCC4 262 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 CACNA2D4Q7Z3S7 1137 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 TRMT11Q7Z4G4 463 aaKnown RBP15.98■□□□□ 0.15
TRIM28-203ENST00000593582 DENND1CQ8IV53 801 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 FMNL3Q8IVF7 1028 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
TRIM28-203ENST00000593582 TXNDC5Q8NBS9 432 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms