RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 SCD5Q86SK9 330 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 TADA2BQ86TJ2 420 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 LONP2Q86WA8 852 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 ARHGAP18Q8N392 663 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 NDRG1Q92597 394 aaKnown RBP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 NAT10Q9H0A0 1025 aaKnown RBP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 CYLDQ9NQC7 956 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.62□□□□□ -0.07
CLIP3-205ENST00000592017 RASAL2Q9UJF2 1139 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 CNTN6Q9UQ52 1028 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 FHOD1Q9Y613 1164 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 CEP250Q9BV73 2442 aa14.62□□□□□ -0.07
CLIP3-205ENST00000592017 ATG13O75143 517 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 PTMSP20962 102 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 CDK11BP21127 795 aaKnown RBP14.61□□□□□ -0.07
CLIP3-205ENST00000592017 TGM1P22735 817 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 SLC6A11P48066 632 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 PSEN1P49768 467 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 GOLGA8FQ08AF8 430 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 GOLGA8DPQ0D2H9 430 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 MESP2Q0VG99 397 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 KCNMA1Q12791 1236 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 PKDCCQ504Y2 493 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 DENND1BQ6P3S1 775 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 MIB1Q86YT6 1006 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 SHC3Q92529 594 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 ST7Q9NRC1 585 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 NCDNQ9UBB6 729 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 DNMT3LQ9UJW3 386 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 DCHS1Q96JQ0 3298 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 KIF26AQ9ULI4 1882 aaPredicted RBP14.61□□□□□ -0.07
CLIP3-205ENST00000592017 MYO16Q9Y6X6 1858 aa14.61□□□□□ -0.07
CLIP3-205ENST00000592017 DENND4CQ5VZ89 1909 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 FANCMQ8IYD8 2048 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 E2F8A0AVK6 867 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 SYCE3A1L190 88 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 K7EQS6 105 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 SLC9A3R1O14745 358 aaPredicted RBP14.6□□□□□ -0.07
CLIP3-205ENST00000592017 HMBSP08397 361 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 KLK7P49862 253 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 COPB1P53618 953 aaKnown RBP14.6□□□□□ -0.07
CLIP3-205ENST00000592017 EFEMP1Q12805 493 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 SIM2Q14190 667 aaPredicted RBP14.6□□□□□ -0.07
CLIP3-205ENST00000592017 FBXO43Q4G163 708 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 KLHDC7AQ5VTJ3 777 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 BTBD8Q5XKL5 378 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 PMF1Q6P1K2 205 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 WDR5BQ86VZ2 330 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 SFTPA1Q8IWL2 248 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 RPLP0P6Q8NHW5 317 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 SLC35F5Q8WV83 523 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 ZNF606Q8WXB4 792 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 KCTD13Q8WZ19 329 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 EXOC4Q96A65 974 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 CDK5RAP1Q96SZ6 601 aaKnown RBP14.6□□□□□ -0.07
CLIP3-205ENST00000592017 KLF16Q9BXK1 252 aaPredicted RBP14.6□□□□□ -0.07
CLIP3-205ENST00000592017 MIS12Q9H081 205 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 CLIC5Q9NZA1 410 aa14.6□□□□□ -0.07
CLIP3-205ENST00000592017 ANAPC1Q9H1A4 1944 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 GREM1O60565 184 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 CNR2P34972 360 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PTK2Q05397 1052 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 DRAP1Q14919 205 aaPredicted RBP14.59□□□□□ -0.07
CLIP3-205ENST00000592017 NCAPHQ15003 741 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 LY6G5CQ5SRR4 150 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PM20D1Q6GTS8 502 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PRR23BQ6ZRT6 265 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 BHLHA9Q7RTU4 235 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 C12orf40Q86WS4 652 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PASD1Q8IV76 773 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 BBS7Q8IWZ6 715 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 CLEC4CQ8WTT0 213 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 EDEM1Q92611 657 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 RMDN1Q96DB5 314 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PCMTD1Q96MG8 357 aaPredicted RBP14.59□□□□□ -0.07
CLIP3-205ENST00000592017 PARD6AQ9NPB6 346 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 CNGB3Q9NQW8 809 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 TBC1D14Q9P2M4 693 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 LSM7Q9UK45 103 aaKnown RBP14.59□□□□□ -0.07
CLIP3-205ENST00000592017 STRIP2Q9ULQ0 834 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 SLC8A2Q9UPR5 921 aa14.59□□□□□ -0.07
CLIP3-205ENST00000592017 YJEFN3A6XGL0 299 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 LGALS16A8MUM7 142 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 E7ENQ6 273 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 FOXN3O00409 490 aaPredicted RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 CHRM1P11229 460 aaPredicted RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 ATP1A3P13637 1013 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 UCHL3P15374 230 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 ZNF18P17022 549 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 GPD2P43304 727 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 ID4P47928 161 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 ZNF165P49910 485 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 DAOAP59103 153 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 LAIR1Q6GTX8 287 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 DPY19L2P1Q6NXN4 242 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 KLHDC10Q6PID8 442 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 SYT13Q7L8C5 426 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 SLC47A2Q86VL8 602 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 USP33Q8TEY7 942 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 RNF139Q8WU17 664 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms