RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 RNF225M0QZC1 329 aaPredicted RBP12.14□□□□□ -0.47
RFX1-204ENST00000588885 PAPSS2O95340 614 aaPredicted RBP12.14□□□□□ -0.47
RFX1-204ENST00000588885 RALAP11233 206 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 TKTL1P51854 596 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 SLC8A3P57103 927 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
RFX1-204ENST00000588885 FANCCQ00597 558 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 PDE4CQ08493 712 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 CETN1Q12798 172 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 EFEMP1Q12805 493 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 FBXO43Q4G163 708 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 EMC10Q5UCC4 262 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 CEP68Q76N32 757 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 APTXQ7Z2E3 356 aaKnown RBP12.14□□□□□ -0.47
RFX1-204ENST00000588885 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 ARHGEF19Q8IW93 802 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 GPR161Q8N6U8 529 aaKnown RBP12.14□□□□□ -0.47
RFX1-204ENST00000588885 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 BHMTQ93088 406 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 RMDN1Q96DB5 314 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 PNKPQ96T60 521 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 PNPLA8Q9NP80 782 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 ZDHHC4Q9NPG8 344 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 CYLDQ9NQC7 956 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 DNMT3LQ9UJW3 386 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 TSPAN16Q9UKR8 245 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.47
RFX1-204ENST00000588885 USP3Q9Y6I4 520 aa12.14□□□□□ -0.47
RFX1-204ENST00000588885 PTPRDP23468 1912 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 PIK3R2O00459 728 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 TRIM24O15164 1050 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 GNA14O95837 355 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 AFPP02771 609 aaKnown RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 VDRP11473 427 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 TBXAS1P24557 533 aaPredicted RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 RGS7P49802 495 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 GAD2Q05329 585 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 DMC1Q14565 340 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 PUM1Q14671 1186 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFX1-204ENST00000588885 KRT31Q15323 416 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 BTBD8Q5XKL5 378 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 TPGS1Q6ZTW0 290 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 UBR7Q8N806 425 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 LMO3Q8TAP4 145 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 USP33Q8TEY7 942 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 ULBP1Q9BZM6 244 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 UBXN6Q9BZV1 441 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 ARHGEF4Q9NR80 690 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 SPHK2Q9NRA0 654 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 HESX1Q9UBX0 185 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 RASAL2Q9UJF2 1139 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 LSM7Q9UK45 103 aaKnown RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
RFX1-204ENST00000588885 INVSQ9Y283 1065 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
RFX1-204ENST00000588885 MYO16Q9Y6X6 1858 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 TBC1D3BA6NDS4 549 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 O00370 1275 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 GREM1O60565 184 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 KAT7O95251 611 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
RFX1-204ENST00000588885 ZBED1O96006 694 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 APODP05090 189 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 LCP1P13796 627 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 SDHBP21912 280 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
RFX1-204ENST00000588885 ZNF75DP51815 510 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
RFX1-204ENST00000588885 BCAT1P54687 386 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 YWHAGP61981 247 aaKnown RBP eCLIP12.12□□□□□ -0.47
RFX1-204ENST00000588885 APBA1Q02410 837 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 RSPO4Q2I0M5 234 aaPredicted RBP12.12□□□□□ -0.47
RFX1-204ENST00000588885 TCP11X2Q5H9J9 407 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 RAB41Q5JT25 222 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 HTR3DQ70Z44 454 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 RSRC2Q7L4I2 434 aaKnown RBP12.12□□□□□ -0.47
RFX1-204ENST00000588885 TADA2BQ86TJ2 420 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 KIAA1958Q8N8K9 716 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
RFX1-204ENST00000588885 ZSWIM1Q9BR11 485 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms