RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 HINFPQ9BQA5 517 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 CNGB3Q9NQW8 809 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 ARHGEF4Q9NR80 690 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 POLR3BQ9NW08 1133 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-220ENST00000581707 MARCH2Q9P0N8 246 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 STRIP2Q9ULQ0 834 aa20.45■□□□□ 0.86
SREBF1-220ENST00000581707 SMG5Q9UPR3 1016 aaKnown RBP20.45■□□□□ 0.86
SREBF1-220ENST00000581707 A0A0A0MRY4 1105 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 GTPBP10A4D1E9 387 aaKnown RBP20.44■□□□□ 0.86
SREBF1-220ENST00000581707 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 HRO43593 1189 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 KAT7O95251 611 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 LCP1P13796 627 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 CNR2P34972 360 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 GRIA2P42262 883 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 RGS7P49802 495 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 MESP2Q0VG99 397 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 MAN2A1Q16706 1144 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 C2orf27AQ580R0 203 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 CT47A1Q5JQC4 288 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-220ENST00000581707 PMF1Q6P1K2 205 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 GJB7Q6PEY0 223 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 Q6ZNB5 142 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 WDR5BQ86VZ2 330 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 ETFBKMTQ8IXQ9 262 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 CAMKK1Q8N5S9 505 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 DEC1Q9P2X7 70 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 ZNF510Q9Y2H8 683 aa20.44■□□□□ 0.86
SREBF1-220ENST00000581707 YJEFN3A6XGL0 299 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 E7ENQ6 273 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 GABBR2O75899 941 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 HMBSP08397 361 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 PON1P27169 355 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 PXNP49023 591 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-220ENST00000581707 KDSRQ06136 332 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 DMC1Q14565 340 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 PREPLQ4J6C6 727 aaPredicted RBP20.43■□□□□ 0.86
SREBF1-220ENST00000581707 BSPRYQ5W0U4 402 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 TPGS1Q6ZTW0 290 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 SFTPA1Q8IWL2 248 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 SCML4Q8N228 414 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 HSFY1Q96LI6 401 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 BBS2Q9BXC9 721 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 DCLK3Q9C098 648 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 OLA1Q9NTK5 396 aaKnown RBP20.43■□□□□ 0.86
SREBF1-220ENST00000581707 WDR35Q9P2L0 1181 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 APEX2Q9UBZ4 518 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 RAB23Q9ULC3 237 aa20.43■□□□□ 0.86
SREBF1-220ENST00000581707 CCDC163A0A0D9SF12 145 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 SLC12A8A0AV02 714 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 ANTXRLA6NF34 631 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 NEDD8-MDP1E9PL57 170 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 PIK3R2O00459 728 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 TULP3O75386 442 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 KLKB1P03952 638 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 PRKCSHP14314 528 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-220ENST00000581707 TNFRSF4P43489 277 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 DAOAP59103 153 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 MRPS21P82921 87 aaKnown RBP20.42■□□□□ 0.86
SREBF1-220ENST00000581707 APBA1Q02410 837 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 SRSF5Q13243 272 aaKnown RBP20.42■□□□□ 0.86
SREBF1-220ENST00000581707 SIM2Q14190 667 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-220ENST00000581707 ARHGAP44Q17R89 818 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 HSP90AA4PQ58FG1 418 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 PHTF2Q8N3S3 785 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 RNF139Q8WU17 664 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 EDEM1Q92611 657 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 HHIPQ96QV1 700 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 NDST4Q9H3R1 872 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 ABCC13Q9NSE7 274 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 MARK1Q9P0L2 795 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 NCDNQ9UBB6 729 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 SPTBN4Q9H254 2564 aa20.42■□□□□ 0.86
SREBF1-220ENST00000581707 TBC1D3BA6NDS4 549 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 MED7O43513 233 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 LETM1O95202 739 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-220ENST00000581707 TYRP14679 529 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 CORO1AP31146 461 aaKnown RBP20.41■□□□□ 0.86
SREBF1-220ENST00000581707 VWA3BQ502W6 1294 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 PRR23BQ6ZRT6 265 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 DCLK2Q8N568 766 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 CCDC33Q8N5R6 958 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 IRGQQ8WZA9 623 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 XPO6Q96QU8 1125 aaKnown RBP20.41■□□□□ 0.86
SREBF1-220ENST00000581707 TUBGCP2Q9BSJ2 902 aa20.41■□□□□ 0.86
SREBF1-220ENST00000581707 MYO18AQ92614 2054 aaKnown RBP20.41■□□□□ 0.86
SREBF1-220ENST00000581707 THAP12O43422 761 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 CACNG3O60359 315 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 FBXO21O94952 628 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 APBB3O95704 486 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 GNA15P30679 374 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 TIE1P35590 1138 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 USP8P40818 1118 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 GPD2P43304 727 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 LPAL2Q16609 132 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 MIIPQ5JXC2 388 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 EMC10Q5UCC4 262 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 RBM43Q6ZSC3 357 aaKnown RBP20.4■□□□□ 0.86
SREBF1-220ENST00000581707 NUDT18Q6ZVK8 323 aa20.4■□□□□ 0.86
SREBF1-220ENST00000581707 FMNL3Q8IVF7 1028 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms