RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 KCNA1Q09470 495 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 TARDBPQ13148 414 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 TEAD4Q15561 434 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 LAYNQ6UX15 382 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 FAM124AQ86V42 546 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 LURAP1LQ8IV03 231 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 NOC3LQ8WTT2 800 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 OVCA2Q8WZ82 227 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 PRCCQ92733 491 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 BHMTQ93088 406 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 IGSF8Q969P0 613 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 MMS19Q96T76 1030 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 MRPL45Q9BRJ2 306 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 NACA2Q9H009 215 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 CKAP5Q14008 2032 aa13.32□□□□□ -0.28
CSNK1D-218ENST00000581655 TP53BP1Q12888 1972 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 PIEZO2Q9H5I5 2752 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 ERVH48-1M5A8F1 160 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 PPP1R37O75864 691 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 LDHAP00338 332 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 IGLV3-19P01714 112 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 ACADMP11310 421 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 DDIT3P35638 169 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 IL12RB1P42701 662 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 TUBP50607 506 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 TLE3Q04726 772 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 RTP5Q14D33 572 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 INAVAQ3KP66 663 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 SFR1Q86XK3 245 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 HVCN1Q96D96 273 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 CALML4Q96GE6 196 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 ANKRD36BP1Q96IX9 119 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 ARID3AQ99856 593 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 LLPHQ9BRT6 129 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 SNX25Q9H3E2 840 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 DPEP3Q9H4B8 488 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 TM9SF3Q9HD45 589 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 PCDHGA1Q9Y5H4 931 aa13.31□□□□□ -0.28
CSNK1D-218ENST00000581655 CBX4O00257 560 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 ENC1O14682 589 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 SYNCRIPO60506 623 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 GREM1O60565 184 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 PTPN1P18031 435 aaKnown RBP13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 GNL1P36915 607 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 GRIA4P48058 902 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 ZNF132P52740 706 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 KCNC4Q03721 635 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 CCDC173Q0VFZ6 552 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 DNAJC3Q13217 504 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 KCNT1Q5JUK3 1230 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 SNX30Q5VWJ9 437 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 SPACA3Q8IXA5 215 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 FAM181AQ8N9Y4 354 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 OR6B3Q8NGW1 331 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 RAD54LQ92698 747 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 FGF11Q92914 225 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 KCNK16Q96T55 309 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 B3GNT5Q9BYG0 378 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 SEMA4CQ9C0C4 833 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 PCED1AQ9H1Q7 454 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 C6orf106Q9H6K1 298 aaPredicted RBP13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 INTS13Q9NVM9 706 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 PTPRJQ12913 1337 aa13.3□□□□□ -0.28
CSNK1D-218ENST00000581655 COL5A1P20908 1838 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 SLC26A4O43511 780 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 RFPL3O75679 317 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 GARTP22102 1010 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 ACSL1P33121 698 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 UBA7P41226 1012 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 COPAP53621 1224 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 SLC5A3P53794 718 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 ORC1Q13415 861 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 ENPP2Q13822 863 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 HES3Q5TGS1 186 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 USP49Q70CQ1 688 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 GATAD2AQ86YP4 633 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 FMNL3Q8IVF7 1028 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 KRI1Q8N9T8 703 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 ACCSQ96QU6 501 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 CBWD1Q9BRT8 395 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 KLF16Q9BXK1 252 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 PCIF1Q9H4Z3 704 aa13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.29□□□□□ -0.283e-7■■■■□ 22.1
CSNK1D-218ENST00000581655 THAP10Q9P2Z0 257 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 LSM7Q9UK45 103 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-218ENST00000581655 EXOC7Q9UPT5 735 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms