RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 ADIGQ0VDE8 80 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 NAIF1Q69YI7 327 aaPredicted RBP21.11■□□□□ 0.97
SMG8-204ENST00000580498 SDE2Q6IQ49 451 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 PKN3Q6P5Z2 889 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 GBP6Q6ZN66 633 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 SCD5Q86SK9 330 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 NAT16Q8N8M0 369 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 UBA3Q8TBC4 463 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 ULBP1Q9BZM6 244 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 ABCC13Q9NSE7 274 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 DNAJC17Q9NVM6 304 aaKnown RBP21.11■□□□□ 0.97
SMG8-204ENST00000580498 NUDT5Q9UKK9 219 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 MMP17Q9ULZ9 603 aa21.11■□□□□ 0.97
SMG8-204ENST00000580498 MYOFQ9NZM1 2061 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 K7EQS6 105 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 MDM4O15151 490 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 SART1O43290 800 aaKnown RBP21.1■□□□□ 0.97
SMG8-204ENST00000580498 FBXO21O94952 628 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 ID4P47928 161 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 SLC6A11P48066 632 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 HARS2P49590 506 aaKnown RBP21.1■□□□□ 0.97
SMG8-204ENST00000580498 DMWDQ09019 674 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 ELF2Q15723 593 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 LPAL2Q16609 132 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 USP39Q53GS9 565 aaKnown RBP21.1■□□□□ 0.97
SMG8-204ENST00000580498 PM20D1Q6GTS8 502 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 TPGS1Q6ZTW0 290 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 TMEM25Q86YD3 366 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 UBR7Q8N806 425 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 PLD4Q96BZ4 506 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 HSFY1Q96LI6 401 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 TRIM62Q9BVG3 475 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 UBE2TQ9NPD8 197 aaPredicted RBP21.1■□□□□ 0.97
SMG8-204ENST00000580498 EBF1Q9UH73 591 aa21.1■□□□□ 0.97
SMG8-204ENST00000580498 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMG8-204ENST00000580498 EP300Q09472 2414 aaPredicted RBP21.1■□□□□ 0.97
SMG8-204ENST00000580498 SLC12A8A0AV02 714 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 PRR5-ARHGAP8B1AHC4 643 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 HRO43593 1189 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 TULP3O75386 442 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 STC2O76061 302 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 HMBSP08397 361 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 LCP1P13796 627 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 TYRP14679 529 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 TIE1P35590 1138 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 PXNP49023 591 aaPredicted RBP21.09■□□□□ 0.97
SMG8-204ENST00000580498 PGFP49763 221 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 ARHGAP8P85298 464 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 EXOC3L4Q17RC7 722 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 GAB4Q2WGN9 574 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 C10orf76Q5T2E6 689 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 SCML4Q8N228 414 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 DCLK2Q8N568 766 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 TERB1Q8NA31 727 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 IRGQQ8WZA9 623 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 LOXL4Q96JB6 756 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 THAP9Q9H5L6 903 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 MARK1Q9P0L2 795 aa21.09■□□□□ 0.97
SMG8-204ENST00000580498 BCCIPQ9P287 314 aaKnown RBP eCLIP21.09■□□□□ 0.97
SMG8-204ENST00000580498 A0A0A0MRY4 1105 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 CACNG3O60359 315 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 RHOBTB1O94844 696 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 KLF8O95600 359 aaPredicted RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 BRD2P25440 801 aaKnown RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 ERCC5P28715 1186 aaPredicted RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 CORO1AP31146 461 aaKnown RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 ACADSBP45954 432 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 ZNF445P59923 1031 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 BYSLQ13895 437 aaKnown RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 CT47A1Q5JQC4 288 aaPredicted RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 SMYD5Q6GMV2 418 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 USP34Q70CQ2 3546 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 C12orf40Q86WS4 652 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 CCDC33Q8N5R6 958 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 ZNF513Q8N8E2 541 aaPredicted RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 LMO3Q8TAP4 145 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 SPACA7Q96KW9 195 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 C2orf42Q9NWW7 574 aa21.08■□□□□ 0.97
SMG8-204ENST00000580498 HBS1LQ9Y450 684 aaKnown RBP21.08■□□□□ 0.97
SMG8-204ENST00000580498 VPS13AQ96RL7 3174 aa21.08■□□□□ 0.96
SMG8-204ENST00000580498 OTOGLQ3ZCN5 2332 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 GTPBP10A4D1E9 387 aaKnown RBP21.07■□□□□ 0.96
SMG8-204ENST00000580498 TPM2P07951 284 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 DGKGP49619 791 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 CRY1Q16526 586 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 BSPRYQ5W0U4 402 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 ARHGEF19Q8IW93 802 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 ETFBKMTQ8IXQ9 262 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 ALLCQ8N6M5 410 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 TXNDC5Q8NBS9 432 aaKnown RBP21.07■□□□□ 0.96
SMG8-204ENST00000580498 UCMAQ8WVF2 138 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 EZH1Q92800 747 aaPredicted RBP21.07■□□□□ 0.96
SMG8-204ENST00000580498 ST7Q9NRC1 585 aa21.07■□□□□ 0.96
SMG8-204ENST00000580498 KIAA1549LQ6ZVL6 1849 aa21.06■□□□□ 0.96
SMG8-204ENST00000580498 GVINP1Q7Z2Y8 2422 aa21.06■□□□□ 0.96
SMG8-204ENST00000580498 PES1O00541 588 aaKnown RBP21.06■□□□□ 0.96
SMG8-204ENST00000580498 USP8P40818 1118 aa21.06■□□□□ 0.96
SMG8-204ENST00000580498 RGS7P49802 495 aa21.06■□□□□ 0.96
SMG8-204ENST00000580498 SNX16P57768 344 aa21.06■□□□□ 0.96
SMG8-204ENST00000580498 SRSF5Q13243 272 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms