RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 FYNP06241 537 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 MYBL1P10243 752 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 GFPT1Q06210 699 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-217ENST00000575711 EFEMP1Q12805 493 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 TAF5Q15542 800 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 ASTE1Q2TB18 679 aaPredicted RBP14.62□□□□□ -0.07
RPAIN-217ENST00000575711 CCDC122Q5T0U0 273 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 PHLDB2Q86SQ0 1253 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 DDX42Q86XP3 938 aaKnown RBP eCLIP14.62□□□□□ -0.07
RPAIN-217ENST00000575711 MIB1Q86YT6 1006 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 GJD3Q8N144 294 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 C3orf20Q8ND61 904 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 TTC16Q8NEE8 873 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 DEPDC1BQ8WUY9 529 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 TRIM11Q96F44 468 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 SLC2A13Q96QE2 648 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 KXD1Q9BQD3 176 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 SELENOOQ9BVL4 669 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 ISCUQ9H1K1 167 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 KCNK12Q9HB15 430 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 METTL5Q9NRN9 209 aaKnown RBP14.62□□□□□ -0.07
RPAIN-217ENST00000575711 MARCH2Q9P0N8 246 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 NAALADL1Q9UQQ1 740 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 CCL26Q9Y258 94 aa14.62□□□□□ -0.07
RPAIN-217ENST00000575711 LEFTY2O00292 366 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 ASGR2P07307 311 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 TCF3P15923 654 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 FECHP22830 423 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 RRM1P23921 792 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 RNASE9P60153 205 aaKnown RBP14.61□□□□□ -0.07
RPAIN-217ENST00000575711 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 DNAJC24Q6P3W2 148 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 VITQ6UXI7 678 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 TMTC1Q8IUR5 882 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 DEFB106AQ8N104 65 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 BPIFB1Q8TDL5 484 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 SH3RF2Q8TEC5 729 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 RSAD2Q8WXG1 361 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 NECAB3Q96P71 396 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-217ENST00000575711 UHRF1Q96T88 793 aaPredicted RBP14.61□□□□□ -0.07
RPAIN-217ENST00000575711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.61□□□□□ -0.07
RPAIN-217ENST00000575711 SFMBT1Q9UHJ3 866 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 C5orf42Q9H799 3197 aa14.61□□□□□ -0.07
RPAIN-217ENST00000575711 SLC12A8A0AV02 714 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 KRT3P12035 628 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 PSMC3P17980 439 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ABCB4P21439 1286 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 NOS2P35228 1153 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 CYLC1P35663 651 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 MATKP42679 507 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 COG7P83436 770 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 USP4Q13107 963 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 MTF1Q14872 753 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ZNF77Q15935 545 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 SYPL2Q5VXT5 272 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 CC2D1AQ6P1N0 951 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ARCQ7LC44 396 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 DNAAF5Q86Y56 855 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 MFSD6LQ8IWD5 586 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 YAF2Q8IY57 180 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 CCDC170Q8IYT3 715 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 DQX1Q8TE96 717 aaKnown RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 KHSRPQ92945 711 aaKnown RBP eCLIP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ZNF653Q96CK0 615 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 RSPRY1Q96DX4 576 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ZFRQ96KR1 1074 aaKnown RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 SERPINB11Q96P15 392 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 BAG1Q99933 345 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 RPP25Q9BUL9 199 aaKnown RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 KLF16Q9BXK1 252 aaPredicted RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 SMOC2Q9H3U7 446 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 GKN1Q9NS71 199 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 SPTLC3Q9NUV7 552 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 PARVAQ9NVD7 372 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 THG1LQ9NWX6 298 aaKnown RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 RRN3Q9NYV6 651 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 CFAP97Q9P2B7 532 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 CNOT8Q9UFF9 292 aaKnown RBP14.6□□□□□ -0.07
RPAIN-217ENST00000575711 TMEM59LQ9UK28 342 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 STAP1Q9ULZ2 295 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 NENFQ9UMX5 172 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 SH3BP1Q9Y3L3 701 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 ANAPC1Q9H1A4 1944 aa14.6□□□□□ -0.07
RPAIN-217ENST00000575711 DOCK8Q8NF50 2099 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 DENND4CQ5VZ89 1909 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 ANKRD62A6NC57 917 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 SIGLEC16A6NMB1 481 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 ATMINO43313 823 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 IRF1P10914 325 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 KPNA1P52294 538 aaPredicted RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 ZXDBP98169 803 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 TDGQ13569 410 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 GRM2Q14416 872 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 TAC4Q86UU9 113 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 RNF135Q8IUD6 432 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 SLC44A3Q8N4M1 653 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 TRMT61BQ9BVS5 477 aaKnown RBP14.59□□□□□ -0.07
RPAIN-217ENST00000575711 PLA2G2FQ9BZM2 168 aa14.59□□□□□ -0.07
RPAIN-217ENST00000575711 FAM204AQ9H8W3 233 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms