RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TLR5O60602 858 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ZBED1O96006 694 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 OAS1P00973 400 aaKnown RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 RARGP13631 454 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 TUBP50607 506 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 STARD6P59095 220 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 BPIFB4P59827 614 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 YWHAGP61981 247 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG6-211ENST00000572369 SLC7A9P82251 487 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 AMPD2Q01433 879 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 TNK2Q07912 1038 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 KCNMA1Q12791 1236 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 RUNX3Q13761 415 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 DRAP1Q14919 205 aaPredicted RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 PDGFRLQ15198 375 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ZNF77Q15935 545 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ZSCAN23Q3MJ62 389 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 BTBD8Q5XKL5 378 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 TRIM68Q6AZZ1 485 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 C1orf210Q8IVY1 113 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 RNF139Q8WU17 664 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 OSCP1Q8WVF1 389 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ZNF606Q8WXB4 792 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 FAM3CQ92520 227 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 SHC3Q92529 594 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ATP2A3Q93084 1043 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 EXOC4Q96A65 974 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 LRRC3BQ96PB8 259 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 SPAG5Q96R06 1193 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 CDK5RAP1Q96SZ6 601 aaKnown RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 BPIFA3Q9BQP9 254 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 ULBP1Q9BZM6 244 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 FOXQ1Q9C009 403 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 SIX2Q9NPC8 291 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 TRPV5Q9NQA5 729 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 FAM207AQ9NSI2 230 aaPredicted RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 GTSE1Q9NYZ3 720 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 CFAP97Q9P2B7 532 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 RASAL2Q9UJF2 1139 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 DNMT3LQ9UJW3 386 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 LSM7Q9UK45 103 aaKnown RBP8.17□□□□□ -1.1
SMG6-211ENST00000572369 NUDT5Q9UKK9 219 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 CNTN6Q9UQ52 1028 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 CEP83Q9Y592 693 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 FHOD1Q9Y613 1164 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 WNT6Q9Y6F9 365 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 COL4A2P08572 1712 aa8.17□□□□□ -1.1
SMG6-211ENST00000572369 FAM170BA6NMN3 283 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 LGALS16A8MUM7 142 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SPECC1L-ADORA2AF8WAN1 911 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 FOXN3O00409 490 aaPredicted RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 SCAMP3O14828 347 aaKnown RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 NFATC1O95644 943 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 OLFM2O95897 454 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SERPINC1P01008 464 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 DCNP07585 359 aaKnown RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 GLULP15104 373 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 ARSAP15289 507 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 UCHL3P15374 230 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 ACADSBP45954 432 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SOX9P48436 509 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 ZNF132P52740 706 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 POLR2FP61218 127 aaKnown RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 EFEMP1Q12805 493 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 USP4Q13107 963 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SYCP1Q15431 976 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 RAB41Q5JT25 222 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 KLHDC7AQ5VTJ3 777 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SNX30Q5VWJ9 437 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 PMF1Q6P1K2 205 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 DENND1BQ6P3S1 775 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 C1orf228Q6PIY5 440 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 CACNA2D4Q7Z3S7 1137 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 MIB1Q86YT6 1006 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 DHX40Q8IX18 779 aaKnown RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 PJA1Q8NG27 643 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 KCTD13Q8WZ19 329 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 MSANTD3Q96H12 275 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 HSFY1Q96LI6 401 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 NOX5Q96PH1 765 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 NELL2Q99435 816 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 ZSWIM1Q9BR11 485 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 MIS12Q9H081 205 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 SYNCQ9H7C4 482 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 NMUR1Q9HB89 426 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 LTB4R2Q9NPC1 389 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 NLRC4Q9NPP4 1024 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 CNGB3Q9NQW8 809 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 OLA1Q9NTK5 396 aaKnown RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMG6-211ENST00000572369 TBC1D14Q9P2M4 693 aa8.16□□□□□ -1.1
SMG6-211ENST00000572369 AJAP1Q9UKB5 411 aaPredicted RBP8.16□□□□□ -1.1
SMG6-211ENST00000572369 GMEB2Q9UKD1 530 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms