RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 KIAA1549LQ6ZVL6 1849 aa21.27■■□□□ 1
CLK3-225ENST00000569063 FRYLO94915 3013 aa21.27■■□□□ 1
CLK3-225ENST00000569063 M0QYV0 167 aa21.27■■□□□ 1
CLK3-225ENST00000569063 TULP3O75386 442 aa21.27■■□□□ 1
CLK3-225ENST00000569063 GABBR2O75899 941 aa21.27■■□□□ 1
CLK3-225ENST00000569063 CALCAP01258 141 aa21.27■■□□□ 1
CLK3-225ENST00000569063 KLKB1P03952 638 aa21.27■■□□□ 1
CLK3-225ENST00000569063 CHRM1P11229 460 aaPredicted RBP21.27■■□□□ 1
CLK3-225ENST00000569063 MTIF2P46199 727 aaKnown RBP21.27■■□□□ 1
CLK3-225ENST00000569063 MFAP3P55082 362 aa21.27■■□□□ 1
CLK3-225ENST00000569063 SEC13P55735 322 aa21.27■■□□□ 1
CLK3-225ENST00000569063 SIM2Q14190 667 aaPredicted RBP21.27■■□□□ 1
CLK3-225ENST00000569063 C2orf27AQ580R0 203 aa21.27■■□□□ 1
CLK3-225ENST00000569063 CT47A1Q5JQC4 288 aaPredicted RBP21.27■■□□□ 1
CLK3-225ENST00000569063 PMF1Q6P1K2 205 aa21.27■■□□□ 1
CLK3-225ENST00000569063 GBP6Q6ZN66 633 aa21.27■■□□□ 1
CLK3-225ENST00000569063 FAM114A1Q8IWE2 563 aa21.27■■□□□ 1
CLK3-225ENST00000569063 SFTPA1Q8IWL2 248 aa21.27■■□□□ 1
CLK3-225ENST00000569063 DCLK2Q8N568 766 aa21.27■■□□□ 1
CLK3-225ENST00000569063 NAT16Q8N8M0 369 aa21.27■■□□□ 1
CLK3-225ENST00000569063 HINFPQ9BQA5 517 aa21.27■■□□□ 1
CLK3-225ENST00000569063 OLA1Q9NTK5 396 aaKnown RBP21.27■■□□□ 1
CLK3-225ENST00000569063 WDR35Q9P2L0 1181 aa21.27■■□□□ 1
CLK3-225ENST00000569063 DEC1Q9P2X7 70 aa21.27■■□□□ 1
CLK3-225ENST00000569063 NCDNQ9UBB6 729 aa21.27■■□□□ 1
CLK3-225ENST00000569063 RAB23Q9ULC3 237 aa21.27■■□□□ 1
CLK3-225ENST00000569063 STRIP2Q9ULQ0 834 aa21.27■■□□□ 1
CLK3-225ENST00000569063 ANTXRLA6NF34 631 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 YJEFN3A6XGL0 299 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 E7ENQ6 273 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 CACNG3O60359 315 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 KRT5P13647 590 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 LCP1P13796 627 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 SLC9A1P19634 815 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 PXNP49023 591 aaPredicted RBP21.26■□□□□ 0.99
CLK3-225ENST00000569063 KDSRQ06136 332 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 SRSF5Q13243 272 aaKnown RBP21.26■□□□□ 0.99
CLK3-225ENST00000569063 EXOC3L4Q17RC7 722 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 HSF5Q4G112 596 aaPredicted RBP21.26■□□□□ 0.99
CLK3-225ENST00000569063 BSPRYQ5W0U4 402 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 SMYD5Q6GMV2 418 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 HSFY1Q96LI6 401 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 BBS2Q9BXC9 721 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 DCLK3Q9C098 648 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 APEX2Q9UBZ4 518 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 EBF1Q9UH73 591 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 MMP17Q9ULZ9 603 aa21.26■□□□□ 0.99
CLK3-225ENST00000569063 MYOFQ9NZM1 2061 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 APBB3O95704 486 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 TYRP14679 529 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 PON1P27169 355 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 KIR2DL1P43626 348 aaPredicted RBP21.25■□□□□ 0.99
CLK3-225ENST00000569063 RGS7P49802 495 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 DAOAP59103 153 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 MEA1Q16626 185 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 MAN2A1Q16706 1144 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 LAIR1Q6GTX8 287 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 PRR23BQ6ZRT6 265 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 TPGS1Q6ZTW0 290 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 NUDT18Q6ZVK8 323 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 GPT2Q8TD30 523 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 KCNV2Q8TDN2 545 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 IRGQQ8WZA9 623 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 XPO6Q96QU8 1125 aaKnown RBP21.25■□□□□ 0.99
CLK3-225ENST00000569063 HHIPQ96QV1 700 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 ABCC13Q9NSE7 274 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 ATG2BQ96BY7 2078 aa21.25■□□□□ 0.99
CLK3-225ENST00000569063 SLC12A8A0AV02 714 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 TBC1D3BA6NDS4 549 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 NEDD8-MDP1E9PL57 170 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 MED7O43513 233 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 HMBSP08397 361 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 CORO1AP31146 461 aaKnown RBP21.24■□□□□ 0.99
CLK3-225ENST00000569063 CHKAP35790 457 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 GPD2P43304 727 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 RPL34P49207 117 aaKnown RBP21.24■□□□□ 0.99
CLK3-225ENST00000569063 GJB7Q6PEY0 223 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 IL17RCQ8NAC3 791 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 RNF139Q8WU17 664 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 GAB3Q8WWW8 586 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 PLD4Q96BZ4 506 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 GMEB2Q9UKD1 530 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 AGO1Q9UL18 857 aaKnown RBP21.24■□□□□ 0.99
CLK3-225ENST00000569063 FAM186AA6NE01 2351 aa21.24■□□□□ 0.99
CLK3-225ENST00000569063 RIF1Q5UIP0 2472 aaKnown RBP21.23■□□□□ 0.99
CLK3-225ENST00000569063 AXIN1O15169 862 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 TIE1P35590 1138 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 APBA1Q02410 837 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 TRIP4Q15650 581 aaPredicted RBP21.23■□□□□ 0.99
CLK3-225ENST00000569063 CRY1Q16526 586 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 VWA3BQ502W6 1294 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 EMC10Q5UCC4 262 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 RBM43Q6ZSC3 357 aaKnown RBP21.23■□□□□ 0.99
CLK3-225ENST00000569063 FMNL3Q8IVF7 1028 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 KIAA2013Q8IYS2 634 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 CCDC33Q8N5R6 958 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 ALLCQ8N6M5 410 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 GPR161Q8N6U8 529 aaKnown RBP21.23■□□□□ 0.99
CLK3-225ENST00000569063 TERB1Q8NA31 727 aa21.23■□□□□ 0.99
CLK3-225ENST00000569063 STK32AQ8WU08 396 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms