RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 SLC4A7Q9Y6M7 1214 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 OR6C75A6NL08 312 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 TLL1O43897 1013 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 STAU1O95793 577 aaKnown RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 GLI1P08151 1106 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 HSPA1AP0DMV8 641 aaKnown RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 HSPA1BP0DMV9 641 aaKnown RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 HARS2P49590 506 aaKnown RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 CAV1Q03135 178 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 TERF2Q15554 542 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 CCDC6Q16204 474 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 FAM182AQ5T1J6 154 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 ZMYND8Q9ULU4 1186 aaPredicted RBP12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 KIAA1217Q5T5P2 1943 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 E2F8A0AVK6 867 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 SLC2A3P11169 496 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 KDELR1P24390 212 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 NDUFV1P49821 464 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 IL31Q6EBC2 164 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 CNKSR3Q6P9H4 555 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 RAPGEF5Q92565 580 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 CNGB3Q9NQW8 809 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
TMEM170A-205ENST00000568559 TRUB2O95900 331 aaKnown RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 SYN1P17600 705 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 MX2P20592 715 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 USP33Q8TEY7 942 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 SP110Q9HB58 689 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 DNAJB4Q9UDY4 337 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CSF2RAP15509 400 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CCR1P32246 355 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 MATKP42679 507 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CCNG2Q16589 344 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 LRRC38Q5VT99 294 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ATP6V0D2Q8N8Y2 350 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 RPRD1AQ96P16 312 aaPredicted RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CXCL16Q9H2A7 254 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ANKZF1Q9H8Y5 726 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 NAALADL1Q9UQQ1 740 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 RTN3O95197 1032 aaPredicted RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 APRTP07741 180 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 RPL17P18621 184 aaKnown RBP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ITIH2P19823 946 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 TYMPP19971 482 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CTNNB1P35222 781 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PMS2P54278 862 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ADAM17P78536 824 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PPIGQ13427 754 aaKnown RBP eCLIP12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 PDK1Q15118 436 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 UPP1Q16831 310 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 LGSNQ5TDP6 509 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 NUP93Q8N1F7 819 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CFAP36Q96G28 342 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 SUSD3Q96L08 255 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 RHOBTB2Q9BYZ6 727 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ABCC13Q9NSE7 274 aa12.6□□□□□ -0.39
TMEM170A-205ENST00000568559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 SYN3O14994 580 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 DDX3YO15523 660 aaKnown RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 COL6A1P12109 1028 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 AMPD1P23109 780 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 PDIA2Q13087 525 aaKnown RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 SCARA3Q6AZY7 606 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 CLEC4CQ8WTT0 213 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 TKTL2Q9H0I9 626 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 NR2E3Q9Y5X4 410 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 DPYSL4O14531 572 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 ENDOD1O94919 500 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 CKMP06732 381 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 LAG3P18627 525 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 ZC3H12AQ5D1E8 599 aaKnown RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 CFAP157Q5JU67 520 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 ALS2CLQ60I27 953 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 LHX8Q68G74 356 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 TAOK1Q7L7X3 1001 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 EXT2Q93063 718 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 DCLK3Q9C098 648 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 HPCAL4Q9UM19 191 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 C9IYK1 514 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 FAM189A1O60320 539 aa12.59□□□□□ -0.39
TMEM170A-205ENST00000568559 LRCH4O75427 683 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms