RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	RSPH3	Q86UC2	560 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	LRRC8A	Q8IWT6	810 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	CCAR2	Q8N163	923 aa	Known RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	CCDC150	Q8NCX0	1101 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	BICD2	Q8TD16	824 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	ACTRT2	Q8TDY3	377 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	COA7	Q96BR5	231 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	TEKT5	Q96M29	485 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	C16orf45	Q96MC5	204 aa	Predicted RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	MPHOSPH8	Q99549	860 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	SH3GL3	Q99963	347 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	TLR10	Q9BXR5	811 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	BATF3	Q9NR55	127 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	HOMER3	Q9NSC5	361 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	DDX19A	Q9NUU7	478 aa	Known RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	GNL3L	Q9NVN8	582 aa	Known RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	CWC25	Q9NXE8	425 aa	Predicted RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	CTTNBP2NL	Q9P2B4	639 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	LRIT1	Q9P2V4	623 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	RRP7A	Q9Y3A4	280 aa	Known RBP	5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	5.37	□□□□□ -1.55	3e-6	■□□□□ 9.4
CBFB-208	ENST00000567947	TNFRSF18	Q9Y5U5	241 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	ABCC4	O15439	1325 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	COL4A5	P29400	1685 aa		5.37	□□□□□ -1.55
CBFB-208	ENST00000567947	TRGV11	A0A075B6L2	103 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	SHTN1	A0MZ66	631 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	MAP2K7	O14733	419 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	ERC2	O15083	957 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	C1QL1	O75973	258 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	MT-CO1	P00395	513 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	IGKV5-2	P06315	115 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	NBPF7	P0C2Y1	421 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	SETSIP	P0DME0	302 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	MYL6B	P14649	208 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	KCNA2	P16389	499 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CAST	P20810	708 aa	Known RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CDKN1C	P49918	316 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	RWDD2B	P57060	319 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	FKBP1A	P62942	108 aa	Known RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	NEXN	Q0ZGT2	675 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	GCKR	Q14397	625 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	PLCB4	Q15147	1175 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	ELF2	Q15723	593 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	ABCB5	Q2M3G0	1257 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	C3orf36	Q3SXR2	165 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	RABL6	Q3YEC7	729 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CCDC152	Q4G0S7	254 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	FLYWCH1	Q4VC44	716 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	PPP4R3A	Q6IN85	833 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	VWA1	Q6PCB0	445 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CCDC186	Q7Z3E2	898 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CLNK	Q7Z7G1	428 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	APLF	Q8IW19	511 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	TEX11	Q8IYF3	940 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	GPATCH11	Q8N954	259 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	NSUN6	Q8TEA1	469 aa	Known RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	SMARCE1	Q969G3	411 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	KLHL32	Q96NJ5	620 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	DMRTA2	Q96SC8	542 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	SLC13A1	Q9BZW2	595 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	VIPAS39	Q9H9C1	493 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	VSX1	Q9NZR4	365 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	ORC3	Q9UBD5	711 aa	Predicted RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	TRMT112	Q9UI30	125 aa	Known RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	GGA2	Q9UJY4	613 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	PCDHA13	Q9Y5I0	950 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	CFAP20	Q9Y6A4	193 aa	Known RBP	5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	MED23	Q9ULK4	1368 aa		5.36	□□□□□ -1.55
CBFB-208	ENST00000567947	COL1A1	P02452	1464 aa	Predicted RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	MYO3B	Q8WXR4	1341 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	PASK	Q96RG2	1323 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947		A0A1B0GUA9	196 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	PI4KAP2	A4QPH2	592 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	CCDC154	A6NI56	674 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	SRRM3	A6NNA2	597 aa	Predicted RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	CHUK	O15111	745 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	PROP1	O75360	226 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	ERLIN1	O75477	346 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	AGFG2	O95081	481 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	C1R	P00736	705 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	ANXA1	P04083	346 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	CD1A	P06126	327 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	TRIM27	P14373	513 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	GCFC2	P16383	781 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	EIF2S2	P20042	333 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	MCM3	P25205	808 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	OAS2	P29728	719 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	PRPH	P41219	470 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	FOLR3	P41439	243 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	PTH2R	P49190	550 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	FXR1	P51114	621 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	GUCY2F	P51841	1108 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	ADK	P55263	362 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	SLC8A3	P57103	927 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	RPS7	P62081	194 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	RPS8	P62241	208 aa	Known RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	POU6F2	P78424	691 aa	Predicted RBP	5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	DRP2	Q13474	957 aa		5.35	□□□□□ -1.55
CBFB-208	ENST00000567947	KRT24	Q2M2I5	525 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms