RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PCNX2	A6NKB5	2137 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	PLXND1	Q9Y4D7	1925 aa		7.27	□□□□□ -1.25
SF3B3-209	ENST00000567635	FRYL	O94915	3013 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TBC1D3B	A6NDS4	549 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	RNF225	M0QZC1	329 aa	Predicted RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TULP2	O00295	520 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	XPO1	O14980	1071 aa	Known RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	MDM4	O15151	490 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	AXIN1	O15169	862 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	LRP3	O75074	770 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TULP3	O75386	442 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	RPP40	O75818	363 aa	Known RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	STC2	O76061	302 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	APBB3	O95704	486 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	AFP	P02771	609 aa	Known RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	RET	P07949	1114 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	ID4	P47928	161 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	PXN	P49023	591 aa	Predicted RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	YWHAG	P61981	247 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	MESP2	Q0VG99	397 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	HSF5	Q4G112	596 aa	Predicted RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	EMC10	Q5UCC4	262 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	LCLAT1	Q6UWP7	414 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	RSRC2	Q7L4I2	434 aa	Known RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	RRAGA	Q7L523	313 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	CACNA2D4	Q7Z3S7	1137 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	C12orf40	Q86WS4	652 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TTC30A	Q86WT1	665 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	MIB1	Q86YT6	1006 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	CREBRF	Q8IUR6	639 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	ETFBKMT	Q8IXQ9	262 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	PPM1K	Q8N3J5	372 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	CCDC33	Q8N5R6	958 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	FAM160A2	Q8N612	972 aa	Predicted RBP	7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	NAT16	Q8N8M0	369 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	MLKL	Q8NB16	471 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	KCNV2	Q8TDN2	545 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	GAB3	Q8WWW8	586 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	KCTD13	Q8WZ19	329 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TFAP2B	Q92481	460 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	HHIP	Q96QV1	700 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	BBS2	Q9BXC9	721 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	DCLK3	Q9C098	648 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	DEC1	Q9P2X7	70 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	EBF1	Q9UH73	591 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	TSPAN16	Q9UKR8	245 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	STRIP2	Q9ULQ0	834 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	MMP17	Q9ULZ9	603 aa		7.26	□□□□□ -1.25
SF3B3-209	ENST00000567635	NEDD8-MDP1	E9PL57	170 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635		O00370	1275 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KLF8	O95600	359 aa	Predicted RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KLKB1	P03952	638 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SETSIP	P0DME0	302 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	TYR	P14679	529 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SDHB	P21912	280 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	TGM1	P22735	817 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	TIE1	P35590	1138 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	CHKA	P35790	457 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KIR2DL1	P43626	348 aa	Predicted RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	DGKE	P52429	567 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	MFAP3	P55082	362 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	GCNT1	Q02742	428 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KDSR	Q06136	332 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SPEM2	Q0P670	501 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	EFEMP1	Q12805	493 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	STIL	Q15468	1287 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	CRY1	Q16526	586 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	PKDCC	Q504Y2	493 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	EOGT	Q5NDL2	527 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	BSPRY	Q5W0U4	402 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635		Q6ZNB5	142 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	CLEC17A	Q6ZS10	378 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	TPGS1	Q6ZTW0	290 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KBTBD6	Q86V97	674 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ARHGEF19	Q8IW93	802 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SFTPA1	Q8IWL2	248 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SIX6OS1	Q8N1H7	587 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SCML4	Q8N228	414 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	PHTF2	Q8N3S3	785 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ALLC	Q8N6M5	410 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	IL17RC	Q8NAC3	791 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	TSTD1	Q8NFU3	115 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	RNF139	Q8WU17	664 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	SLC35F5	Q8WV83	523 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	NDRG1	Q92597	394 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	KAT5	Q92993	513 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	MS4A3	Q96HJ5	214 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	LOXL4	Q96JB6	756 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ZC3H10	Q96K80	434 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	DCBLD2	Q96PD2	775 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	XPO6	Q96QU8	1125 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	MED15	Q96RN5	788 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	ULBP1	Q9BZM6	244 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	INTS2	Q9H0H0	1204 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	CLSTN2	Q9H4D0	955 aa		7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	UBE2T	Q9NPD8	197 aa	Predicted RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	OLA1	Q9NTK5	396 aa	Known RBP	7.25	□□□□□ -1.25
SF3B3-209	ENST00000567635	DNAJC17	Q9NVM6	304 aa	Known RBP	7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms