RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 DNAJC16Q9Y2G8 782 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 PCDHB7Q9Y5E2 793 aa5.68□□□□□ -1.5
CNOT1-209ENST00000566240 A1L4Q6 167 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 PRSS47A8MTI9 375 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 STX16-NPEPL1H3BU86 382 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 STX16O14662 325 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 CDKL5O76039 1030 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 NDUFA10O95299 355 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 TBX18O95935 607 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 CYP21A2P08686 494 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 EIF4A1P60842 406 aaKnown RBP5.67□□□□□ -1.5
CNOT1-209ENST00000566240 PDCLQ13371 301 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 TOB2Q14106 344 aaPredicted RBP5.67□□□□□ -1.5
CNOT1-209ENST00000566240 BEAN1Q3B7T3 259 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 CAND1Q86VP6 1230 aaKnown RBP5.67□□□□□ -1.5
CNOT1-209ENST00000566240 RAB11FIP4Q86YS3 637 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 LRRC71Q8N4P6 559 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 B3GALNT2Q8NCR0 500 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 OVCA2Q8WZ82 227 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 REXO5Q96IC2 774 aaKnown RBP5.67□□□□□ -1.5
CNOT1-209ENST00000566240 ADOQ96SZ5 270 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 BAG5Q9UL15 447 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 ZBTB1Q9Y2K1 713 aa5.67□□□□□ -1.5
CNOT1-209ENST00000566240 LOC105369274A0A096LPK9 316 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 LOC102723532A0A0G2JNH3 316 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 GXYLT2A0PJZ3 443 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 SLC38A8A6NNN8 435 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 PSMD9O00233 223 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 PRRG2O14669 202 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 KIAA0355O15063 1070 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 SLC16A3O15427 465 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 FAM20BO75063 409 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 RNASEH2AO75792 299 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 HSP90AA1P07900 732 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 DDX6P26196 483 aaKnown RBP eCLIP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 KCNJ12Q14500 433 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 ICAM4Q14773 271 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 TBRG1Q3YBR2 411 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 L1TD1Q5T7N2 865 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 FAM90A2PQ658T7 463 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 ATG16L1Q676U5 607 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 CFAP161Q6P656 301 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 DSTYKQ6XUX3 929 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 C4orf50Q6ZRC1 276 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 RASGRP2Q7LDG7 609 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 KRT27Q7Z3Y8 459 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 MAVSQ7Z434 540 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 OR4N4Q8N0Y3 316 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 CPEB3Q8NE35 698 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 SOCS4Q8WXH5 440 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 RFFLQ8WZ73 363 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 ST8SIA4Q92187 359 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 RSPRY1Q96DX4 576 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 DPCDQ9BVM2 203 aaPredicted RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 AGXT2Q9BYV1 514 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 PAIP1Q9H074 479 aaKnown RBP5.66□□□□□ -1.5
CNOT1-209ENST00000566240 BLOC1S4Q9NUP1 217 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 FBXO28Q9NVF7 368 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 TMLHEQ9NVH6 421 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 ARHGAP26Q9UNA1 814 aa5.66□□□□□ -1.5
CNOT1-209ENST00000566240 VWA3AA6NCI4 1184 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 TSPAN3O60637 253 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 HNRNPA1P09651 372 aaKnown RBP eCLIP5.65□□□□□ -1.5
CNOT1-209ENST00000566240 THBS4P35443 961 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 BMPR1AP36894 532 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 LIPAP38571 399 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 DGKQP52824 942 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 CASP6P55212 293 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ITIH3Q06033 890 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 EIF2B5Q13144 721 aaKnown RBP5.65□□□□□ -1.5
CNOT1-209ENST00000566240 BFSP2Q13515 415 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ST3GAL2Q16842 350 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ZNF484Q5JVG2 852 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 SLC9C2Q5TAH2 1124 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 TTLL10Q6ZVT0 673 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 TMPRSS6Q8IU80 811 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 LPIN2Q92539 896 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 FUBP1Q96AE4 644 aaKnown RBP5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ZBTB10Q96DT7 871 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 KTI12Q96EK9 354 aaPredicted RBP5.65□□□□□ -1.5
CNOT1-209ENST00000566240 NEUROD6Q96NK8 337 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ADAM2Q99965 735 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 SERHL2Q9H4I8 314 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 ZCCHC4Q9H5U6 513 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 RXFP3Q9NSD7 469 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 AURKAIP1Q9NWT8 199 aaPredicted RBP5.65□□□□□ -1.5
CNOT1-209ENST00000566240 AFG3L2Q9Y4W6 797 aa5.65□□□□□ -1.5
CNOT1-209ENST00000566240 DYTNA2CJ06 578 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 SAC3D1A6NKF1 404 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 A8MVJ9 347 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 B8ZZF3 427 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 M0QYT0 321 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 M0QZQ0 153 aa5.64□□□□□ -1.51
CNOT1-209ENST00000566240 SEPT4O43236 478 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms