RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 URB1O60287 2271 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 LOC400499M0QZD8 3231 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 FAM92AA1XBS5 289 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 PRRT4C9JH25 899 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 EIF3DO15371 548 aaKnown RBP eCLIP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 ZNF217O75362 1048 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 STAU1O95793 577 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 SYPP08247 313 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 IRF1P10914 325 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 TUBP50607 506 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 SLC5A3P53794 718 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 CDH8P55286 799 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 SNRPFP62306 86 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 CYP24A1Q07973 514 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 SLC14A1Q13336 389 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 PLEKHG6Q3KR16 790 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 PREPLQ4J6C6 727 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 GRAMD4Q6IC98 578 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 TOGARAM2Q6ZUX3 1019 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 NUDT18Q6ZVK8 323 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 HTR3DQ70Z44 454 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 EPM2AIP1Q7L775 607 aaPredicted RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 FAM35AQ86V20 835 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 CHPFQ8IZ52 775 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 PNPLA1Q8N8W4 532 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 ADAMTS14Q8WXS8 1223 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 CCDC127Q96BQ5 260 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 TIGD1Q96MW7 591 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 GABRG3Q99928 467 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 DNAJC17Q9NVM6 304 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 NXF1Q9UBU9 619 aaKnown RBP14.16□□□□□ -0.14
COMMD4-214ENST00000566230 RAD54BQ9Y620 910 aa14.16□□□□□ -0.14
COMMD4-214ENST00000566230 HELZ2Q9BYK8 2649 aaKnown RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 WASH3PC4AMC7 463 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 CACNG3O60359 315 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 CISD3P0C7P0 127 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 FTH1P19P0C7X4 201 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 MAOBP27338 520 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 SOWAHCQ53LP3 525 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 SLCO6A1Q86UG4 719 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 ELOA2Q8IYF1 753 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 FUKQ8N0W3 1084 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 FMR1NBQ8N0W7 255 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 ZMIZ2Q8NF64 920 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 ENGASEQ8NFI3 743 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 ELMO3Q96BJ8 720 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 MRGPRX1Q96LB2 322 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 IPO9Q96P70 1041 aaKnown RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 KLF16Q9BXK1 252 aaPredicted RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 GOLPH3LQ9H4A5 285 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 SMYD3Q9H7B4 428 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 AGPAT3Q9NRZ7 376 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 SMG1Q96Q15 3661 aaKnown RBP14.15□□□□□ -0.14
COMMD4-214ENST00000566230 CELSR3Q9NYQ7 3312 aa14.15□□□□□ -0.14
COMMD4-214ENST00000566230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 NEDD8-MDP1E9PL57 170 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CLIC2O15247 247 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 KLRC4O43908 158 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 BEST1O76090 585 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 TBX18O95935 607 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 TYRP14679 529 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CASP1P29466 404 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CYP2J2P51589 502 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 SDE2Q6IQ49 451 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CCNI2Q6ZMN8 369 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 NAXDQ8IW45 347 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 RGL4Q8IZJ4 473 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 P2RY11Q96G91 374 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 SMOQ99835 787 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 MED10Q9BTT4 135 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 BBS2Q9BXC9 721 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 SDCBP2Q9H190 292 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 FAM124BQ9H5Z6 455 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 DMAP1Q9NPF5 467 aaPredicted RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 COMMD8Q9NX08 183 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CACNA2D2Q9NY47 1150 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 MARK1Q9P0L2 795 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 CGNQ9P2M7 1197 aaKnown RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 HOOK1Q9UJC3 728 aaKnown RBP14.14□□□□□ -0.15
COMMD4-214ENST00000566230 PCDHB9Q9Y5E1 797 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 BPTFQ12830 3046 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 NUMA1Q14980 2115 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 ATP8B3O60423 1300 aa14.14□□□□□ -0.15
COMMD4-214ENST00000566230 ZBTB24O43167 697 aaPredicted RBP14.13□□□□□ -0.15
COMMD4-214ENST00000566230 TLR5O60602 858 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 CBFA2T3O75081 653 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 NDUFS2O75306 463 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 AP1G2O75843 785 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 KIF20AO95235 890 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 RPN1P04843 607 aaKnown RBP14.13□□□□□ -0.15
COMMD4-214ENST00000566230 ATICP31939 592 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 DPYDQ12882 1025 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 GRIK2Q13002 908 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 TRPC3Q13507 836 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 COL28A1Q2UY09 1125 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 KMT5BQ4FZB7 885 aa14.13□□□□□ -0.15
COMMD4-214ENST00000566230 SYCP2LQ5T4T6 812 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms