RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SKOR2Q2VWA4 1001 aaPredicted RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 PLK5Q496M5 336 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 PABPC1LQ4VXU2 614 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 FAM78AQ5JUQ0 283 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 VITQ6UXI7 678 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 ALKAL1Q6UXT8 129 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 CYP26C1Q6V0L0 522 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 WDR5BQ86VZ2 330 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 ZBTB8OSQ8IWT0 167 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 DHX40Q8IX18 779 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 COLGALT2Q8IYK4 626 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 SYCP3Q8IZU3 236 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 ARMC10Q8N2F6 343 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 OR2I1PQ8NGU4 316 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 SLC7A14Q8TBB6 771 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 NOC3LQ8WTT2 800 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 KCNN1Q92952 543 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 C18orf25Q96B23 403 aaPredicted RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 ZFYVE19Q96K21 471 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 FAM213AQ9BRX8 229 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 TCHPQ9BT92 498 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 TRMT61BQ9BVS5 477 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 SRRTQ9BXP5 876 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 MRPL4Q9BYD3 311 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 PDE11AQ9HCR9 933 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 VPS45Q9NRW7 570 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 TOPORSQ9NS56 1045 aaPredicted RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 PRMT7Q9NVM4 692 aaPredicted RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 FANCLQ9NW38 375 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 IPPQ9Y573 584 aa6.61□□□□□ -1.35
UBFD1-204ENST00000565634 ZFP37Q9Y6Q3 630 aaPredicted RBP6.61□□□□□ -1.35
UBFD1-204ENST00000565634 SPTA1P02549 2419 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 TLDC2A0PJX2 215 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 PDXKO00764 312 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 PPEF2O14830 753 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 HNRNPDLO14979 420 aaKnown RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 EIF3DO15371 548 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 FOXD2O60548 495 aaPredicted RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 ECI2O75521 394 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 NR3C1P04150 777 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CXCL8P10145 99 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 ATP1A3P13637 1013 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 FCARP24071 287 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 LIG4P49917 911 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CDC42EP1Q00587 391 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 ADAM9Q13443 819 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 COBLL1Q53SF7 1204 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 RTP2Q5QGT7 225 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 SASS6Q6UVJ0 657 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CD300LGQ6UXG3 332 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 LUZP1Q86V48 1076 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 JAZF1Q86VZ6 243 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 ZC3H3Q8IXZ2 948 aaKnown RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CACTIN-AS1Q8N1I8 211 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 ZNF843Q8N446 348 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 OR5B17Q8NGF7 314 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 URGCPQ8TCY9 931 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 POMGNT1Q8WZA1 660 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CCDC74AQ96AQ1 378 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 BICD1Q96G01 975 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 DHTKD1Q96HY7 919 aaPredicted RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CAMK1GQ96NX5 476 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 HHIPQ96QV1 700 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 GAD1Q99259 594 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CLSTN3Q9BQT9 956 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 PAAF1Q9BRP4 392 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 LACRTQ9GZZ8 138 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 C2orf40Q9H1Z8 148 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CCDC86Q9H6F5 360 aaKnown RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 RSAD1Q9HA92 442 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 TMEM9BQ9NQ34 198 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 CPSF3Q9UKF6 684 aaKnown RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 AGO2Q9UKV8 859 aaKnown RBP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBFD1-204ENST00000565634 TRAF3IP3Q9Y228 551 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 PTPRQQ9UMZ3 2332 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 MYLKQ15746 1914 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 COL6A6A6NMZ7 2263 aa6.6□□□□□ -1.35
UBFD1-204ENST00000565634 COL12A1Q99715 3063 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 PHLPP2Q6ZVD8 1323 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 TTC26A0AVF1 554 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 BCLAF3A2AJT9 711 aaKnown RBP6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ANTXRLA6NF34 631 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ARL5CA6NH57 179 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 PTGESO14684 152 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 CLDN3O15551 220 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 ZNF623O75123 536 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 TNFRSF21O75509 655 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 TOM1L1O75674 476 aa6.59□□□□□ -1.35
UBFD1-204ENST00000565634 RECQL4O94761 1208 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms