RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 RXRGP48443 463 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 C16orf72Q14CZ0 275 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 TMEM132BQ14DG7 1078 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 OASLQ15646 514 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SMAD1Q15797 465 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SMTNL2Q2TAL5 461 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 ZNF410Q86VK4 478 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 LZICQ8WZA0 190 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 PDCD2LQ9BRP1 358 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 ARMC7Q9H6L4 198 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 AS3MTQ9HBK9 375 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 CEPT1Q9Y6K0 416 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 FER1L6Q2WGJ9 1857 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 KBTBD13C9JR72 458 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 XPO1O14980 1071 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 CDH2P19022 906 aaPredicted RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SH3BGRP55822 239 aaPredicted RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 BASP1P80723 227 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 ATG14Q6ZNE5 492 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 GADL1Q6ZQY3 521 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 STXBP4Q6ZWJ1 553 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 NUDCD3Q8IVD9 361 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 RNF148Q8N7C7 305 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 TTC13Q8NBP0 860 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 EXD1Q8NHP7 514 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 FARP1Q9Y4F1 1045 aaPredicted RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 NDC80O14777 642 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 RARRES1P49788 294 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 FAM91A1Q658Y4 838 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 APOBEC3FQ8IUX4 373 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SLC9A9Q8IVB4 645 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 CFAP36Q96G28 342 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 ZNF778Q96MU6 729 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 NT5C1BQ96P26 610 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SHOC2Q9UQ13 582 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 DMTF1Q9Y222 760 aa16.86■□□□□ 0.29
LINC00554-201ENST00000564841 HBS1LQ9Y450 684 aaKnown RBP16.86■□□□□ 0.29
LINC00554-201ENST00000564841 SNRNP35Q16560 246 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 KLHL38Q2WGJ6 581 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 KCNT1Q5JUK3 1230 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 ALKBH8Q96BT7 664 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 ELP3Q9H9T3 547 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 PXMP2Q9NR77 195 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 RAB20Q9NX57 234 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 XPO7Q9UIA9 1087 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 SNCAIPQ9Y6H5 919 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 SDR42E2A6NKP2 422 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 XPOTO43592 962 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 TOM1L1O75674 476 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 NR3C2P08235 984 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 ALOX15P16050 662 aaPredicted RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 YWHABP31946 246 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 RPL22P35268 128 aaKnown RBP16.85■□□□□ 0.29
LINC00554-201ENST00000564841 GMPRP36959 345 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 CD97P48960 835 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 FSTL1Q12841 308 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 VGLL4Q14135 290 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 TREML2Q5T2D2 321 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 RNF169Q8NCN4 708 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 LRRN4Q8WUT4 740 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 CORO1BQ9BR76 489 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
LINC00554-201ENST00000564841 PSTPIP1O43586 416 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 PLA2G6O60733 806 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 ZNF24P17028 368 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SLC18A2Q05940 514 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 KRT81Q14533 505 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 C16orf46Q6P387 395 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 FRMD7Q6ZUT3 714 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 CRLF3Q8IUI8 442 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SLC15A3Q8IY34 581 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 NUP93Q8N1F7 819 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 MARVELD2Q8N4S9 558 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SMYD1Q8NB12 490 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 GIPC3Q8TF64 312 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 UPF1Q92900 1129 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00554-201ENST00000564841 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 STRA6Q9BX79 667 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 IQANK1A0A1B0GTG1 560 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 DHX15O43143 795 aaKnown RBP16.84■□□□□ 0.29
LINC00554-201ENST00000564841 AP1G1O43747 822 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 STRNO43815 780 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 STAMBPO95630 424 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SERPINA6P08185 405 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 WEE2P0C1S8 567 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 CNTN2Q02246 1040 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 TEX44Q53QW1 395 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 ITPRIPL1Q6GPH6 555 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SPOCD1Q6ZMY3 1216 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 MON1BQ7L1V2 547 aa16.84■□□□□ 0.29
LINC00554-201ENST00000564841 SULF1Q8IWU6 871 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms