RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SCML4Q8N228 414 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 RPLP0P6Q8NHW5 317 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 RNF139Q8WU17 664 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 ABCC13Q9NSE7 274 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 ANO10Q9NW15 660 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 ZNF510Q9Y2H8 683 aa19.23■□□□□ 0.67
SYNGR3-204ENST00000564642 SLC12A8A0AV02 714 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 CHURC1-FNTBB4DL54 471 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 PIK3R2O00459 728 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 GREM1O60565 184 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 EEF1GP26641 437 aaKnown RBP19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 PREPLQ4J6C6 727 aaPredicted RBP19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 CCDC183Q5T5S1 534 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 PKN3Q6P5Z2 889 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 TPGS1Q6ZTW0 290 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 BHLHA9Q7RTU4 235 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 NAT16Q8N8M0 369 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 EZH1Q92800 747 aaPredicted RBP19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 GOLGA1Q92805 767 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 DCLK3Q9C098 648 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 ARHGEF4Q9NR80 690 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 ST7Q9NRC1 585 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 C2orf42Q9NWW7 574 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 DNAJC12Q9UKB3 198 aa19.22■□□□□ 0.67
SYNGR3-204ENST00000564642 YJEFN3A6XGL0 299 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 E7ENQ6 273 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 K7EQS6 105 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 K7ESF4 209 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 HOXC11O43248 304 aaPredicted RBP19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 LILRB5O75023 590 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 FBXO21O94952 628 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 KAT7O95251 611 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 TPM2P07951 284 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 GPD2P43304 727 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 SEC13P55735 322 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 DAOAP59103 153 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 NUDT18Q6ZVK8 323 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 C12orf40Q86WS4 652 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 IRGQQ8WZA9 623 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 SHC3Q92529 594 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 EDEM1Q92611 657 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 ACDQ96AP0 544 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 XPO6Q96QU8 1125 aaKnown RBP19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 BBS2Q9BXC9 721 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 MIS12Q9H081 205 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 SIX2Q9NPC8 291 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 WDR35Q9P2L0 1181 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 KIAA1549LQ6ZVL6 1849 aa19.21■□□□□ 0.67
SYNGR3-204ENST00000564642 BECN2A8MW95 431 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 NEDD8-MDP1E9PL57 170 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 CORO1AP31146 461 aaKnown RBP19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 CHKAP35790 457 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 GRIA2P42262 883 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 ACADSBP45954 432 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 FNTBP49356 437 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 PTK2Q05397 1052 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 KDSRQ06136 332 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 STX1AQ16623 288 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 C2orf27AQ580R0 203 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 HEATR6Q6AI08 1181 aaKnown RBP19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 SMYD5Q6GMV2 418 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 DENND1BQ6P3S1 775 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 Q6ZNB5 142 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 LONP2Q86WA8 852 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 DEC1Q9P2X7 70 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 SFMBT1Q9UHJ3 866 aa19.2■□□□□ 0.66
SYNGR3-204ENST00000564642 A0A0A0MRY4 1105 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 TBC1D3BA6NDS4 549 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 TULP3O75386 442 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 GABBR2O75899 941 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 HOXA6P31267 233 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 DMWDQ09019 674 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 MEA1Q16626 185 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 SYT13Q7L8C5 426 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 FMNL3Q8IVF7 1028 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 USP33Q8TEY7 942 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 STK32AQ8WU08 396 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 PLD4Q96BZ4 506 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 ACP6Q9NPH0 428 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 TAB2Q9NYJ8 693 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 SPTBN4Q9H254 2564 aa19.19■□□□□ 0.66
SYNGR3-204ENST00000564642 ZFHX2Q9C0A1 2572 aaPredicted RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 LTFP02788 710 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 KLKB1P03952 638 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 TYRP14679 529 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 CNR2P34972 360 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 TNFRSF4P43489 277 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 HARS2P49590 506 aaKnown RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 MRPS21P82921 87 aaKnown RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 KCNMA1Q12791 1236 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 RAPGEF1Q13905 1077 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 DMC1Q14565 340 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 C11orf57Q6ZUT1 292 aaPredicted RBP19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 DENND1CQ8IV53 801 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 SCUBE3Q8IX30 993 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 ETFBKMTQ8IXQ9 262 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 CAMKK1Q8N5S9 505 aa19.18■□□□□ 0.66
SYNGR3-204ENST00000564642 SUMF1Q8NBK3 374 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms