RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 LRTOMTQ8WZ04 291 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 APIPQ96GX9 242 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 ZFYVE19Q96K21 471 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 MSLNLQ96KJ4 702 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 HIST1H2AAQ96QV6 131 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 CINPQ9BW66 212 aaPredicted RBP5.13□□□□□ -1.59
CHD9-212ENST00000564641 BRIP1Q9BX63 1249 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 FZD4Q9ULV1 537 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 CAPN11Q9UMQ6 739 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 HS3ST3B1Q9Y662 390 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 SPATA31A1Q5TZJ5 1347 aa5.13□□□□□ -1.59
CHD9-212ENST00000564641 GOLIM4O00461 696 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 TULP3O75386 442 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 MYF5P13349 255 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 MCM5P33992 734 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 ITGA8P53708 1063 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 EIF4A1P60842 406 aaKnown RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 RPS16P62249 146 aaKnown RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 SEC23BQ15437 767 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 C3orf38Q5JPI3 329 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 RNF220Q5VTB9 566 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 DARS2Q6PI48 645 aaKnown RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 PIP4P1Q86T03 277 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 COL23A1Q86Y22 540 aaPredicted RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 TCEAL8Q8IYN2 117 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 BCAS4Q8TDM0 211 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 CHST8Q9H2A9 424 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 TMEM184CQ9NVA4 438 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 COL20A1Q9P218 1284 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 MID2Q9UJV3 735 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 TTBK1Q5TCY1 1321 aaPredicted RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 URB2Q14146 1524 aaKnown RBP5.12□□□□□ -1.59
CHD9-212ENST00000564641 WDR97A6NE52 1622 aa5.12□□□□□ -1.59
CHD9-212ENST00000564641 CD8B2A6NJW9 211 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 BTF3P20290 206 aaKnown RBP5.11□□□□□ -1.59
CHD9-212ENST00000564641 RBL1P28749 1068 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 FAM193AP78312 1265 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 GPC5P78333 572 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 SLC14A1Q13336 389 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 STIM1Q13586 685 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 KLHL22Q53GT1 634 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 PLAG1Q6DJT9 500 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 USP49Q70CQ1 688 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 ANKRD13AQ8IZ07 590 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 MAGEB6Q8N7X4 407 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 KAZALD1Q96I82 304 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 MARK4Q96L34 752 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 ADGRE3Q9BY15 652 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 USP29Q9HBJ7 922 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 HEY2Q9UBP5 337 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 ITGB1BP2Q9UKP3 347 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 DNMBPQ6XZF7 1577 aa5.11□□□□□ -1.59
CHD9-212ENST00000564641 IGKV2D-30A0A075B6S6 120 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 GOLGA6CA6NDK9 693 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 GOLGA6BA6NDN3 693 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 FAM90A8PA6NJQ4 464 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 FYB1O15117 783 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 MAP4K4O95819 1239 aaPredicted RBP5.1□□□□□ -1.59
CHD9-212ENST00000564641 FAM90A13PP0C7W8 464 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 FAM90A24PP0C7X0 464 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 GOLGA6DP0CG33 693 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 IL1R1P14778 569 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 COL15A1P39059 1388 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 JAK3P52333 1124 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 LINC00205P59089 165 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 CCDC15Q0P6D6 951 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 PPP2R5AQ15172 486 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 NFE2Q16621 373 aaPredicted RBP5.1□□□□□ -1.59
CHD9-212ENST00000564641 MIDNQ504T8 468 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 PPP4R4Q6NUP7 873 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 LVRNQ6Q4G3 990 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 CCDC149Q6ZUS6 474 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.1□□□□□ -1.59
CHD9-212ENST00000564641 METTL25Q8N6Q8 603 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.1□□□□□ -1.59
CHD9-212ENST00000564641 C11orf44Q8N8P7 122 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 TOPBP1Q92547 1522 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 LYZL4Q96KX0 146 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 FAM227BQ96M60 508 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 GOLGA6AQ9NYA3 693 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 ZNF580Q9UK33 172 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 NOB1Q9ULX3 412 aaKnown RBP5.1□□□□□ -1.59
CHD9-212ENST00000564641 SLC27A6Q9Y2P4 619 aa5.1□□□□□ -1.59
CHD9-212ENST00000564641 THRAP3Q9Y2W1 955 aaKnown RBP5.1□□□□□ -1.59
CHD9-212ENST00000564641 AGPSO00116 658 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 INPPL1O15357 1258 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 ZBED1O96006 694 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 TMEM225BP0DP42 221 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 CARSP49589 748 aaKnown RBP5.09□□□□□ -1.59
CHD9-212ENST00000564641 COPAP53621 1224 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 DEUP1Q05D60 604 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 LEXMQ3ZCV2 418 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 CLEC9AQ6UXN8 241 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 C9orf47Q6ZRZ4 202 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 UNC13DQ70J99 1090 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 CHST15Q7LFX5 561 aaPredicted RBP5.09□□□□□ -1.59
CHD9-212ENST00000564641 MBD3L2Q8NHZ7 208 aaPredicted RBP5.09□□□□□ -1.59
CHD9-212ENST00000564641 STRBPQ96SI9 672 aaKnown RBP5.09□□□□□ -1.59
CHD9-212ENST00000564641 NUAK2Q9H093 628 aa5.09□□□□□ -1.59
CHD9-212ENST00000564641 SEMA5BQ9P283 1151 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms